| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0227 |
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| Symbol | |
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| ID | 3971137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 243589 |
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| End bp | 245010 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637923340 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_530121 |
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| Protein GI | 90421751 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00400027 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGATT CAAAATCCGC CGCCCCGACC ACCCTGTACG ACAAGATCTG GAACGACCAT
CTGGTGCACG AGGCCGACGA CGGCACCTGC CTGCTCTATA TCGATCGCCA CCTGGTGCAC
GAGGTGACGT CGCCGCAGGC GTTCGAAGGG CTGCGCACCG CCGGCCGCAA AGTCCATGCG
CCGGAGAAGA CGCTGGCGGT GGTCGATCAC AACGTGCCGA CCACCGATCG CTCAAAACCC
AATCCGGATC CGGAAAGCGC CGACCAGATC GCGGCCTTGG CCGAGAACGC CCGCGAATTC
GGCGTCACCT ACTACAACGA ATTCGACAAG CGGCAGGGCG TGGTCCACGT CATCGGCCCG
GAGCAGGGCT TCACGCTGCC CGGCACCACC ATCGTCTGCG GTGACAGCCA CACCTCGACG
CATGGCGCGT TCGGCGCGCT GGCGCACGGC ATCGGCACCT CCGAGGTCGA GCACGTGCTG
GCGACGCAGA CGCTGATCCA GAAGAAGGCC AAGAACATGC GCGTCACCGT TGACGGCGCA
TTGCCGGACG GCGTCACCGC GAAAGATATC ATCCTGGCGA TCATCGGCGA GATCGGCACC
GCGGGCGGCA CCGGCTACGT GCTGGAATAT GCCGGCAGTG CGATCCGCGC GCTGTCGATG
GAAGGCCGCA TGACGGTGTG CAACATGTCG ATCGAAGGCG GCGCCCGCGC CGGCCTGATC
GCACCGGACG AAAAAGCCTA TGCGTACTTG AAGGGCCGGC CGATGGCGCC GACCGGCGCC
AATTGGGACG CCGCGATGCG CTATTGGGAA ACGCTACGCT CCGACGAAGG CGCGCATTTC
GACCACGAGC TCCGGCTCGA TGCGGCCGCA CTGCCGCCGA TCGTCACCTG GGGCACCTCG
CCCGAAGACG TGATCTCGAT CTTGGGCAGC GTGCCGAACC CGGCCGACAT CGCCGACGAG
GCCAAGCGGC TCTCCAAGGA GCGCGCGCTG GCCTATATGG GCCTCACTGC CGGCACCAAG
ATCACCGACA TCAAGATCGA CCGCGCCTTC ATCGGCTCCT GCACCAACGG CCGGATCGAG
GATCTGCGCG CCGCGGCGAA AGTCGCCGAG GGCAAGACCG TCAACGGCAA CGTCAACGCC
ATCATCGTGC CGGGCTCCGG CCTGGTGAAG GAACAGGCGG AAGCCGAAGG GCTCGACAAG
ATCTTCATTG CGGCGGGCTT CGAATGGCGC GAGCCGGGCT GCTCGATGTG CCTGGCGATG
AACCCCGACA AGCTGGCGCC GGACGAGCGC TGCGCCTCGA CCTCGAACCG CAATTTCGAA
GGCCGCCAGG GCTTCAAGGG CCGCACCCAT CTGGTGTCGC CGGCGATGGC GGCGGCGGCG
GCGATCGCCG GCCACTTCGT CGATATCCGC GACTGGCGCT GA
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| Protein sequence | MTDSKSAAPT TLYDKIWNDH LVHEADDGTC LLYIDRHLVH EVTSPQAFEG LRTAGRKVHA
PEKTLAVVDH NVPTTDRSKP NPDPESADQI AALAENAREF GVTYYNEFDK RQGVVHVIGP
EQGFTLPGTT IVCGDSHTST HGAFGALAHG IGTSEVEHVL ATQTLIQKKA KNMRVTVDGA
LPDGVTAKDI ILAIIGEIGT AGGTGYVLEY AGSAIRALSM EGRMTVCNMS IEGGARAGLI
APDEKAYAYL KGRPMAPTGA NWDAAMRYWE TLRSDEGAHF DHELRLDAAA LPPIVTWGTS
PEDVISILGS VPNPADIADE AKRLSKERAL AYMGLTAGTK ITDIKIDRAF IGSCTNGRIE
DLRAAAKVAE GKTVNGNVNA IIVPGSGLVK EQAEAEGLDK IFIAAGFEWR EPGCSMCLAM
NPDKLAPDER CASTSNRNFE GRQGFKGRTH LVSPAMAAAA AIAGHFVDIR DWR
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