Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0221 |
Symbol | |
ID | 3971170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 238910 |
End bp | 240454 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637923334 |
Product | signal recognition particle protein |
Protein accession | YP_530115 |
Protein GI | 90421745 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.115082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0089568 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTCGACA ATCTGTCGGA AAAGCTTGGT GGCATTCTCA ATCGGCTGAC CCGCCGCGGG TCGCTGACCG AGGCCGACGT CGACGCCGCG ATGCGCGAAG TGCGCCGCGC GCTGCTCGAG GCCGACGTCT CGCTCGACGT GGTGAAGAGC TTCACCGACA AGGTCCGCGA GCAGGCGATC GGCGCCACCG TGGTGAAGTC GGTGACGCCC GGCCAGATGG TGGTCAAGAT CGTCCATGAC GAGCTGGTCG CCACGCTCGG CTCCGACGCC CAGATCATCG ACCTCAACGC CGTGCCGCCG GTGCCGATCA TGATGGTCGG TCTGCAGGGC TCCGGCAAAA CCACCACCAC CGCCAAGCTC GCCCGCCGCC TCACCCAGCG CGACAAGCGC CGTGTGCTGA TGGCCTCGCT CGACGTCTAT CGCCCGGCGG CGATGGAGCA GTTAGCAATC CTCGGCCGCG ATCTCGAGAT CGACACGCTG CCGATCGTCG ACGGCCAGAA GCCGGCGCAG ATCGCGCGCC GCGCCATCGA GGCCGCCAAG CTCGGCGGCT ACGACGTGGT GCTGCTCGAC ACCGCCGGCC GCACCACGCT CGACGACGAG ATGATGGCGG AAGCCGCCGA GATCAAAGCC GTCGCCAGCC CGCACGAAGT GCTGCTGGTC GCCGACTCGC TCACCGGCCA GGACGCCGTC AATCTGGCGC GCGCCTTCGA CACCCAGGTC GGCCTCACCG GCATCGTGCT GACGCGCGTC GACGGCGACG GCCGCGGCGG CGCCGCGCTG TCGATGCGCG CCGTCACCGG CAAGCCGATC AAGCTGATGG GCACCGGCGA AAAGACCGAC GCGCTGGAAG ATTTTCATCC GAGCCGGATC GCCGGCCGGA TCCTCGGCAT GGGCGACGTG GTGTCGCTGG TCGAGAAGGC CGCCTCGCAT CTCGACGCCG AGAAGGCCGC CGCCGTCGCC GAGAAGATGC GCAAGGGGCA ATTCGACCTC TCCGACATGC GCGAACAATT GCTGCAGATG ACCAAGATGG GCGGCATCGG CGGGCTGATG GGGCTGATGC CCGGCATCGC CAAGATGAAG AGCCAGATCG CCGCCTCGCG GATCGACGAC AAGGTGCTGA GCCGGCAGAT CGCGATCATC GATTCGATGA CCCGGCAGGA GCGCAAGAAC CCCGACATCC TCAAGGCCAG CCGCAAGAAG CGGATCGCCG CGGGCGCCGG GCTGAAGGTC GAAGAGGTCA ACAAGCTGCT GAAAATGCAC CGCAACATGG CCGACATGAT GAAGGCCGTG GGACGCGGCA AGGGCGGCCC GATGGCCGGT CTCGCGCAGG CCATGGGGTT CGGCGGCGGC ATGCCCTCGC CGGAACAGAT CAAGGCGATG CAGGAGCAGC AGGCCCAGGG CGGCGGCGGA TTGCCGGAGT TGCCGAAGGA TCTGCCGCCG AGCCTGCGCG GCGGACTGCC GAAACTTCCC GGCCTCACGG GCTTAAGCGG CAAGCCGACG CTGCCGGGCC TCGGCGGCTT CCCGGGCTTC GGGAAAAAGA AATGA
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Protein sequence | MFDNLSEKLG GILNRLTRRG SLTEADVDAA MREVRRALLE ADVSLDVVKS FTDKVREQAI GATVVKSVTP GQMVVKIVHD ELVATLGSDA QIIDLNAVPP VPIMMVGLQG SGKTTTTAKL ARRLTQRDKR RVLMASLDVY RPAAMEQLAI LGRDLEIDTL PIVDGQKPAQ IARRAIEAAK LGGYDVVLLD TAGRTTLDDE MMAEAAEIKA VASPHEVLLV ADSLTGQDAV NLARAFDTQV GLTGIVLTRV DGDGRGGAAL SMRAVTGKPI KLMGTGEKTD ALEDFHPSRI AGRILGMGDV VSLVEKAASH LDAEKAAAVA EKMRKGQFDL SDMREQLLQM TKMGGIGGLM GLMPGIAKMK SQIAASRIDD KVLSRQIAII DSMTRQERKN PDILKASRKK RIAAGAGLKV EEVNKLLKMH RNMADMMKAV GRGKGGPMAG LAQAMGFGGG MPSPEQIKAM QEQQAQGGGG LPELPKDLPP SLRGGLPKLP GLTGLSGKPT LPGLGGFPGF GKKK
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