| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0207 |
|---|
| Symbol | |
|---|
| ID | 3971156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 227572 |
|---|
| End bp | 228324 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637923320 |
|---|
| Product | heme exporter protein CcmC |
|---|
| Protein accession | YP_530101 |
|---|
| Protein GI | 90421731 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0307586 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGA TCGATCTCGC CAATCCGACC CGGTTCCTGA AGCTGACGGA GCGCGTGCTG
CCTTGGCTGA CGGGGCTGAC CGCGCTGCTG CTGGCGATCG GGCTCGTCCA ATCGGCGCTG
GCGCCGGACG ATTATCAGCA GGGCGCCACC GTCAAGATCA TGTTCGTCCA CGTCCCCAAC
GCCTGGCTGG CGATGTTCGT CTGGGGCATC ATGAGCCTGT CGGCGCTCGG CACGCTGGTG
TGGCGGCATC CCTTGGCGGA CGTCGCGGCG AAAGCCGCCG CCCCGATCGG CGCCGCCTTC
ACTTTTCTGG CGCTGGTCAC CGGCTCGCTA TGGGGCCGGC CGATGTGGGG CACCTATTGG
GAATGGGACG CCCGCCTCAC CTCGATGCTG ATCCTGTTCC TGATGTATCT CGGGCTGATC
GCGCTGTGGC GCGCGGTGGA GGATCCTTCC CGCGCCGCCC GGGCCGCGGC GATCTTCACG
CTGGTCGGCG CGATCAATCT GCCGATCATC AAGTTCTCGG TGGACTGGTG GAATACGCTG
CATCAGCCGG CCTCGGTGCT GCGGGTTGGC GGGCCGGCGC TCGACAAGTC GTTCCTGATG
CCGCTGCTGG TGATGGCGAT CGCGTTCTCG CTGTTGTTCA TCACGCTGCA TCTCGCTGCG
ATGCGCAACG AGATTTTGCG CCGCAGGGTG CGGGCGCTGC AGATGCTGCA GGCCAGCGAG
CAGCAGGGTC AGCTGCGATC GGGGGCGCTG TGA
|
|---|
| Protein sequence | MTLIDLANPT RFLKLTERVL PWLTGLTALL LAIGLVQSAL APDDYQQGAT VKIMFVHVPN
AWLAMFVWGI MSLSALGTLV WRHPLADVAA KAAAPIGAAF TFLALVTGSL WGRPMWGTYW
EWDARLTSML ILFLMYLGLI ALWRAVEDPS RAARAAAIFT LVGAINLPII KFSVDWWNTL
HQPASVLRVG GPALDKSFLM PLLVMAIAFS LLFITLHLAA MRNEILRRRV RALQMLQASE
QQGQLRSGAL
|
|---|
| |