| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0179 |
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| Symbol | |
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| ID | 3971206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 195702 |
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| End bp | 197906 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637923292 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_530073 |
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| Protein GI | 90421703 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCATT CCACGCGCTC CTCCAGTTCC TCGGCGACCC GCGTGGTCGA CGTGCTGCTG
CCGGTTGCGC TCGATCAGGC TTATTCCTAC CGGGTGCCGC GCGGGGTGGA GCTTGCGCCG
GGCGACGTGG TCTGCGTGCC GCTCGGCGCC CGCGAGGTGA TCGGCGTGGT CTGGGCCGAC
AACCCCAACC CCGATCCCCG GCTGCATAAC CGGCTGAAGG ACGTCGACTC CAAGCTGGAT
GTGCCGCGGT TTCGCGAGGA ATTGCGCCGG CTGGTCGACT GGGTGGCGAA TTACACGCTG
TCGCCGCGCG GCCAGGTGCT ACGGATGACG CTGCGGATGG GCGAGCATCT CGGCCCGGAG
CGGGTGCGGC TCGGCGTGCG GCTGGTCGGA CCAAAGCCGC AGCGGATGAC GCCGGCGCGG
GCGCGGCTGA TCGAGATTCT GTCCGACGGG CTGTTGCACG GCAAATCCGA CGCGATCAAA
GAGGCCGGCT GCTCGCCTGG CGTGGTCGAC GGGCTGGTCG ACGAGGGCAC GCTCAAGGTC
GAGCCGATGG CCCGCGCGCT GGCGCCGCCC GCGCCGGACC CGGATTTCGC GCAGCCGGAT
TTTTCGCCTG AGCAAACCAC GGCGGCCGAC AGCCTGCGGG CGTTGGCGGC CGGCGGCGCG
TTCAAGGTGG CGCTGCTCGA TGGCGTCACC GGCTCCGGCA AGACAGAAGT GTATTTCGAG
GCGGTCGCCG AGATCATCCG CCGCGGCGAG CAGACCTTGA TCCTGATGCC CGAAATCGCG
CTGACCGGGC AGTTTCTCGA CCGCTTCGCG CAACGCTTCG GGGTGCGTCC GCTGGAATGG
CACTCCGAAT TGACCCCGCG CACCCGCGCC CGCAACTGGG CGGCGATCGC CGCCGGCGAG
GCGCAGGTGG TGGTCGGCGC CCGCTCGGCG CTGTTCCTGC CTTATGCCAA GCTCGGGCTG
ATCATCGTCG ATGAGGAGCA CGACCAGGCC TACAAGCAGG ACGAGGGCGC GCATTACCAC
GCCCGCGACA TGGCGGTGGT GCGCGCGAGC ATCGCCAAAA TCCCGATCAT TCTCGCCTCG
GCGACGCCGT CGGTGGAGAG CGAGGTCAAC GCCCGCAAAG GCCGCTACCA GCGTGTCGCG
CTGCCGTCGC GGTTCGGCGG CCAGCACATG CCGCAGATCG AGGCCATCGA TCTGCGCCGC
GAAGGGCCGA TGCGCGGCCG CTATATCGCC CCAAGGCTGG CCGAGCAGAT CGGCATCGCT
ATCGAGCGCC GCGAACAGGC GCTATTATTC CTCAACCGCC GCGGCTATGC GCCGCTGACG
CTGTGCCGGG CCTGCGGCCA CCGCTTCGCC TGCACGATCT GCGACGCCTG GCTGGTCGAC
CACCGTTTTC GCCAACGCCT GGTTTGCCAC CATTGCGGCT TCTCGATGCC GCGGCCAAAA
CTCTGCCCAC ACTGCAACGC CGAAGAATCT TTAGTCGCAG TCGGCCCCGG CGTGGAGCGG
CTGCAGGAGG AGGCGCAGAA GCTGTTTCCC GACGCCCGCA CCATGGTGCT GTCGAGCGAT
CTCGTCACCT CGATCGAATC GATGCGCTCG GAATTGACCG AGATCGCCGA GGGCCGCGTC
GACATCATCA TCGGCACCCA ATTGGTCGCC AAGGGGCACA ATTTCCCGAG ACTTAATCTG
GTGGGCGTGA TCGACGCCGA TCTCGGGCTC GGCAACGGCG ATCCGCGCGC CGCCGAGCGC
ACCTATCAAT TGCTCAATCA GGTGATCGGC CGCGCCGGCC GCGACCAGGG CTATGGCATA
GGCTATCTGC AGACCCACCA GCCGGAGCAT CCGGTGATGA AGGCGCTGGT CGCCTGCGAC
CGCGAGGCGT TTTACGAAAG CGAAATCGAC GCCCGCGAGC GCACCGGCTA CCCGCCGTTC
GGGCGGCTCG CCAGCCTGAT CGTCTCGGCC GGCGATCGGC CGACCGCCGA GGGGTTTGCG
CGCAAATTGG TGGCGATGTC GCCGCTAGAT GAGCGGATCA AGGTGCTGGG ACCGGCGGAG
GCGCCGTTGG CGGTGATCAA GGGCCGCTAT CGATTCCGCA TCCTGGTGAA GTCGGCGCGA
GGCGTCGACC TGTCGAGCTA TCTGCGGCAG TGGCTGGCGC TGGGGCCGAA GACCACCGGC
AATCTCAATC TCGAAGTCGA CGTCGATCCG CAGAGCTTTT TGTAG
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| Protein sequence | MDHSTRSSSS SATRVVDVLL PVALDQAYSY RVPRGVELAP GDVVCVPLGA REVIGVVWAD
NPNPDPRLHN RLKDVDSKLD VPRFREELRR LVDWVANYTL SPRGQVLRMT LRMGEHLGPE
RVRLGVRLVG PKPQRMTPAR ARLIEILSDG LLHGKSDAIK EAGCSPGVVD GLVDEGTLKV
EPMARALAPP APDPDFAQPD FSPEQTTAAD SLRALAAGGA FKVALLDGVT GSGKTEVYFE
AVAEIIRRGE QTLILMPEIA LTGQFLDRFA QRFGVRPLEW HSELTPRTRA RNWAAIAAGE
AQVVVGARSA LFLPYAKLGL IIVDEEHDQA YKQDEGAHYH ARDMAVVRAS IAKIPIILAS
ATPSVESEVN ARKGRYQRVA LPSRFGGQHM PQIEAIDLRR EGPMRGRYIA PRLAEQIGIA
IERREQALLF LNRRGYAPLT LCRACGHRFA CTICDAWLVD HRFRQRLVCH HCGFSMPRPK
LCPHCNAEES LVAVGPGVER LQEEAQKLFP DARTMVLSSD LVTSIESMRS ELTEIAEGRV
DIIIGTQLVA KGHNFPRLNL VGVIDADLGL GNGDPRAAER TYQLLNQVIG RAGRDQGYGI
GYLQTHQPEH PVMKALVACD REAFYESEID ARERTGYPPF GRLASLIVSA GDRPTAEGFA
RKLVAMSPLD ERIKVLGPAE APLAVIKGRY RFRILVKSAR GVDLSSYLRQ WLALGPKTTG
NLNLEVDVDP QSFL
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