Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0178 |
Symbol | |
ID | 3971205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 194913 |
End bp | 195392 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637923291 |
Product | rare lipoprotein A |
Protein accession | YP_530072 |
Protein GI | 90421702 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTGCAT TGAAAACACC GGCGCTGCGC ATCACGACTG GGCCGAAAAC GGCCATGGCC ATGATCGTCG CCTCTGTCTT TCTTGGAGGG GCGATCACCG AAGCCTCGGC GAAGGCCCGG CACCATCGTC ACCACAGCCA TCACGCCGGC CACAGTTCCT GGCGCGCCGC CAACGCCTCG GTTGCCGAGG GGGCGGGCGG CCGCAGCTTC GCCGGCATGG CGTCGTATTA CGGCAATGAA TCCGGCAGCC GCACCGCGTC GGGCCAGCGC ATGAACGCCA GCGCGATGAC CGCGGCGCAT CGCTCGCTGC CATTCGGCAC CAAACTGCGC GTCACCCACG GCGAGCGCAG CGTCATCGTC ACCATCAACG ACCGCGGCCC GTTCATCCGC GGCCGGGTGC TCGATCTGTC GACGGGCGCC GCCCGGGCGA TCGGACTGAC CAGCCGCGGC GTCGGCCGGG TGGTCGCGGA AGTCATGTAA
|
Protein sequence | MVALKTPALR ITTGPKTAMA MIVASVFLGG AITEASAKAR HHRHHSHHAG HSSWRAANAS VAEGAGGRSF AGMASYYGNE SGSRTASGQR MNASAMTAAH RSLPFGTKLR VTHGERSVIV TINDRGPFIR GRVLDLSTGA ARAIGLTSRG VGRVVAEVM
|
| |