Gene RPC_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0178 
Symbol 
ID3971205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp194913 
End bp195392 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content69% 
IMG OID637923291 
Productrare lipoprotein A 
Protein accessionYP_530072 
Protein GI90421702 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCAT TGAAAACACC GGCGCTGCGC ATCACGACTG GGCCGAAAAC GGCCATGGCC 
ATGATCGTCG CCTCTGTCTT TCTTGGAGGG GCGATCACCG AAGCCTCGGC GAAGGCCCGG
CACCATCGTC ACCACAGCCA TCACGCCGGC CACAGTTCCT GGCGCGCCGC CAACGCCTCG
GTTGCCGAGG GGGCGGGCGG CCGCAGCTTC GCCGGCATGG CGTCGTATTA CGGCAATGAA
TCCGGCAGCC GCACCGCGTC GGGCCAGCGC ATGAACGCCA GCGCGATGAC CGCGGCGCAT
CGCTCGCTGC CATTCGGCAC CAAACTGCGC GTCACCCACG GCGAGCGCAG CGTCATCGTC
ACCATCAACG ACCGCGGCCC GTTCATCCGC GGCCGGGTGC TCGATCTGTC GACGGGCGCC
GCCCGGGCGA TCGGACTGAC CAGCCGCGGC GTCGGCCGGG TGGTCGCGGA AGTCATGTAA
 
Protein sequence
MVALKTPALR ITTGPKTAMA MIVASVFLGG AITEASAKAR HHRHHSHHAG HSSWRAANAS 
VAEGAGGRSF AGMASYYGNE SGSRTASGQR MNASAMTAAH RSLPFGTKLR VTHGERSVIV
TINDRGPFIR GRVLDLSTGA ARAIGLTSRG VGRVVAEVM