Gene RPC_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0175 
Symbol 
ID3971202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp191169 
End bp192047 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content65% 
IMG OID637923288 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_530069 
Protein GI90421699 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCAC TGAAAGACAT GCGCGTCCGC ATCGCCTCGA CCAAGGCGAC GCAGAAGATC 
ACCAAGGCCA TGCAGATGGT GGCGGCTTCC AAGCTGCGCC GCGCGCAATT GGCCGCCGAA
GCCGCCAGGC CCTATGCCGA GCGGATGGAT GCGGTGATTT CCAACATCGC AAGCGCCGCG
GCCGGCTCGC CCGGCGCCCC GGTGCTGCTC GCCGGCACCG GCAAGGACCA GGTCCACCTG
CTGCTGGTGT GCACCGGCGA ACGCGGCCTG TCCGGCGCGT TCAACTCCTC GATCGTCCGG
TTGGCGCGCG AGCGCGCGCT CAGCCTGATG AACCAGGGCA AGGAAGTGAA GCTGTTCTGC
GTCGGCCGCA AAGGCTACGA GCAGCTGCGC CGCACTTTCG ACCGCCAGAT CGTCGAGAAC
ATCGAGCTGC GCTCGGTGCG CCAGCTCGGC TTCGTCAACG CCGAAGACAT CGCCCACAAG
GTGGTGGCGC GCTTCAACAA CGGCGAATTC GACGTCTGCA CGCTGTTCTA TTCGCGCTTC
AAGTCGGTGA TCTCGCAGAT CCCGACCGCG CAGCAGATCA TTCCGCTGGT GGTGGAGGCG
CCCGCCGCCA ACGCCGGTCC GGCGACGTCC TACGAATACG AGCCCGAAGA GGACGAGATC
CTCGCCGGCC TGTTGCCGCG CAATCTCGCG GTGCAGATTT TCCGCGCGCT GCTCGAGAAT
AATGCCTCGT TCTACGGCGC GCAGATGAGC GCGATGGACA ACGCCACGCG CAACGCCGGC
GACATGATCC GCAAGCAGAC ACTGATCTAC AACCGCACCC GCCAGGCCAT GATCACCAAG
GAATTGATCG AGATCATTTC CGGCGCCGAG GCGATCTGA
 
Protein sequence
MASLKDMRVR IASTKATQKI TKAMQMVAAS KLRRAQLAAE AARPYAERMD AVISNIASAA 
AGSPGAPVLL AGTGKDQVHL LLVCTGERGL SGAFNSSIVR LARERALSLM NQGKEVKLFC
VGRKGYEQLR RTFDRQIVEN IELRSVRQLG FVNAEDIAHK VVARFNNGEF DVCTLFYSRF
KSVISQIPTA QQIIPLVVEA PAANAGPATS YEYEPEEDEI LAGLLPRNLA VQIFRALLEN
NASFYGAQMS AMDNATRNAG DMIRKQTLIY NRTRQAMITK ELIEIISGAE AI