Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0171 |
Symbol | |
ID | 3971198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 186986 |
End bp | 187960 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637923284 |
Product | delta-aminolevulinic acid dehydratase |
Protein accession | YP_530065 |
Protein GI | 90421695 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGCAG CCTTCCCGAT TGTCCGTCCG CGGCGACTGC GCCGCAGCGA AGCGCTGCGC CAATTGGTGC GCGAAACCCG GGTCTGCGCC CACGACCTGA TCTATCCGAT CTTCGTCGAG GAACAGATCG ACGACGCGGT GCCGATCGCC ACGATGCCCG GCGTGCTTCG CATTCCCGAG CGAAAACTCG CCGCCGAGAT CGAGCGGATC GCGCGGGACG GCGTCAAGGC GGTGTTGCTG TTCGGCATTT CGCATCATAA GGACGCGATC GGCAGCGATA GCTGGAATCC GGACGGGCTG ATGGCGCGGA TGGTGCGGAT CGCCAAGGCT GCGGCGCCCG AGCTGGTGGT GATCACCGAC AACTGCTTCT GCGAATACAC CCTGCACGGC CATTGCGGCT CACTGCGGGG CGACAGCGTC GATAACGACG CCACGCTACT CAATCTCGGT CGCCAGGCGG TGGTGGCGAT CGAGGCCGGC GCCGACATGG TGGCGCCGTC GGCGATGATG GACGGTCAGA TCCAGGCGAT GCGCACGGCG CTCGACGAAG CCGGGCATTG CGAGGCGCCG ATCCTGGCCT ATTCGTCGAA ATTCGCCTCG GCGCTGTATG GGCCGTTCCG GGTGGCCGCC GGCTCGGAGC TCGAGGGCGA TCGGCGAAGT TATCAGATGG ACCCGATGAA CGGCCGCGAA GCGCTGCGGG AATCCGCGCT CGACGAGGCG GAGGGCGCCG ATCTGTTGAT GGTGAAGCCG GCGCTGGCCT ATCTCGACGT GCTGGCGGCG CTGCGCGCGC GCACCGAGCT GCCGCTGGTC GCCTATCAGG TCGGCGGCGA ATACGCGATG ATCAAATTCG CAGCAATGGC CGGCGCGCTC GACGAAGCCG CGACCGTGCG CGAGACGCTC GGCGCGATCA AACGCGCCGG CGCCGATCTG ATCATCAGCT ATTTCGCCCG CGACATCGCG CGCGACGGCT GGTGA
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Protein sequence | MVAAFPIVRP RRLRRSEALR QLVRETRVCA HDLIYPIFVE EQIDDAVPIA TMPGVLRIPE RKLAAEIERI ARDGVKAVLL FGISHHKDAI GSDSWNPDGL MARMVRIAKA AAPELVVITD NCFCEYTLHG HCGSLRGDSV DNDATLLNLG RQAVVAIEAG ADMVAPSAMM DGQIQAMRTA LDEAGHCEAP ILAYSSKFAS ALYGPFRVAA GSELEGDRRS YQMDPMNGRE ALRESALDEA EGADLLMVKP ALAYLDVLAA LRARTELPLV AYQVGGEYAM IKFAAMAGAL DEAATVRETL GAIKRAGADL IISYFARDIA RDGW
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