Gene RPC_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0171 
Symbol 
ID3971198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp186986 
End bp187960 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content67% 
IMG OID637923284 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_530065 
Protein GI90421695 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCAG CCTTCCCGAT TGTCCGTCCG CGGCGACTGC GCCGCAGCGA AGCGCTGCGC 
CAATTGGTGC GCGAAACCCG GGTCTGCGCC CACGACCTGA TCTATCCGAT CTTCGTCGAG
GAACAGATCG ACGACGCGGT GCCGATCGCC ACGATGCCCG GCGTGCTTCG CATTCCCGAG
CGAAAACTCG CCGCCGAGAT CGAGCGGATC GCGCGGGACG GCGTCAAGGC GGTGTTGCTG
TTCGGCATTT CGCATCATAA GGACGCGATC GGCAGCGATA GCTGGAATCC GGACGGGCTG
ATGGCGCGGA TGGTGCGGAT CGCCAAGGCT GCGGCGCCCG AGCTGGTGGT GATCACCGAC
AACTGCTTCT GCGAATACAC CCTGCACGGC CATTGCGGCT CACTGCGGGG CGACAGCGTC
GATAACGACG CCACGCTACT CAATCTCGGT CGCCAGGCGG TGGTGGCGAT CGAGGCCGGC
GCCGACATGG TGGCGCCGTC GGCGATGATG GACGGTCAGA TCCAGGCGAT GCGCACGGCG
CTCGACGAAG CCGGGCATTG CGAGGCGCCG ATCCTGGCCT ATTCGTCGAA ATTCGCCTCG
GCGCTGTATG GGCCGTTCCG GGTGGCCGCC GGCTCGGAGC TCGAGGGCGA TCGGCGAAGT
TATCAGATGG ACCCGATGAA CGGCCGCGAA GCGCTGCGGG AATCCGCGCT CGACGAGGCG
GAGGGCGCCG ATCTGTTGAT GGTGAAGCCG GCGCTGGCCT ATCTCGACGT GCTGGCGGCG
CTGCGCGCGC GCACCGAGCT GCCGCTGGTC GCCTATCAGG TCGGCGGCGA ATACGCGATG
ATCAAATTCG CAGCAATGGC CGGCGCGCTC GACGAAGCCG CGACCGTGCG CGAGACGCTC
GGCGCGATCA AACGCGCCGG CGCCGATCTG ATCATCAGCT ATTTCGCCCG CGACATCGCG
CGCGACGGCT GGTGA
 
Protein sequence
MVAAFPIVRP RRLRRSEALR QLVRETRVCA HDLIYPIFVE EQIDDAVPIA TMPGVLRIPE 
RKLAAEIERI ARDGVKAVLL FGISHHKDAI GSDSWNPDGL MARMVRIAKA AAPELVVITD
NCFCEYTLHG HCGSLRGDSV DNDATLLNLG RQAVVAIEAG ADMVAPSAMM DGQIQAMRTA
LDEAGHCEAP ILAYSSKFAS ALYGPFRVAA GSELEGDRRS YQMDPMNGRE ALRESALDEA
EGADLLMVKP ALAYLDVLAA LRARTELPLV AYQVGGEYAM IKFAAMAGAL DEAATVRETL
GAIKRAGADL IISYFARDIA RDGW