Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0166 |
Symbol | |
ID | 3971271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 181243 |
End bp | 182601 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637923279 |
Product | carboxyl-terminal protease |
Protein accession | YP_530060 |
Protein GI | 90421690 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.97074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGCA AGACTTCGGT AATTCTGCTG AGCGTTGCCA CCGGCGCGGC GCTCACATTG TTCGTGACCC AACCGCGATC GATCCTGATG GGATCCACCG CGCGGGCCGC GACCTCCGAC ACCTATCGCC AGCTCAATCT GTTCGGCGAC GTGTTCGAAC GGGTGCGCAG CGACTATGTC GAAAAGCCCG ACGACTCCAA GCTGGTGGAA TCCGCGATCA GCGGCATGCT GACCGGGCTC GATCCGCATT CCAGCTACAT GGATGCCAAG AGCTTCCGCG ACATGCAGGT GCAGACCCGC GGCGAGTTCG GCGGCCTCGG CATCGAGGTC ACCATGGAAG ACGGTCTGAT CAAGGTGGTG TCGCCGATCG ACGATACCCC GGCCTCGAAG GCCGGCATTA TGGCCAACGA CATCATCACC AATCTCGACG ACGAGGCGGT GCAGGGCCTG ACGCTCAATC AGGCGGTCGA GAAGATGCGC GGCCCGGTCA ACACCAAGAT CCGGCTGAAG ATCGTCCGCA AGGGCCAGGA CAATCCGATC GACGTCACTT TGGTGCGTGA CAACATCCGC GTCCGCTCGG TGCGCGCCCG CGTCGAAGGC GACGACATCG GCTACATCCG CATCACCACC TTCAACGAGC AGACCACCGA AGGCTTGAAG CGCGAACTCG CCGCCCTCAC CACCCAGATC GGCAACGACA AGCTGAAGGG CTGGATTCTC GACCTGCGCA ACAACCCGGG CGGCCTCTTG GAAGAAGCCG TGACGGTGTC GGATGCGTTC CTTGATCGCG GCGAAATCGT CTCCACCCGC GGCCGCAACG CCGAAGAAAC CCAGCGCCGC GCCGCCCATG GGGGCGACCT CGCCAAGGGC AAGCAGGTCA TCGTGCTGAT CAATGGCGGC TCGGCTTCGG CGTCGGAAAT CGTCGCCGGC GCGCTGCAGG ATCACAAGCG CGCCACGCTG GTCGGCACCC GCTCGTTCGG CAAGGGCTCG GTGCAGACCA TCATTCCGCT CGGAAGCGGC AACGGCGCGC TGCGGCTGAC CACGGCGCGC TACTTCACGC CGTCCGGCAA GTCGATCCAG GCCAAGGGCA TCACCCCGGA CATCGAGGTG CTGCAGGACG TGCCCGACGA GATCAAGTCG CGCACCGACA CCAAGGGCGA AGCCTCGCTG CGCGGCCATC TGAAGGCCGA AGGCGACGAG AAGACCGGGT CGCAATCCTA CGTGCCGCCG GAAGCCAAGG ACGACAAGGC GTTGAAGATG GCGGCCGACC TGCTGCACGG CGTCAAGGTC AACGCCACCG CGCCGGCCAC CGGCGACAAG GCGGCGATCG ACAAGCCGGC CGGCAAGGTC GAGAACTGA
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Protein sequence | MMRKTSVILL SVATGAALTL FVTQPRSILM GSTARAATSD TYRQLNLFGD VFERVRSDYV EKPDDSKLVE SAISGMLTGL DPHSSYMDAK SFRDMQVQTR GEFGGLGIEV TMEDGLIKVV SPIDDTPASK AGIMANDIIT NLDDEAVQGL TLNQAVEKMR GPVNTKIRLK IVRKGQDNPI DVTLVRDNIR VRSVRARVEG DDIGYIRITT FNEQTTEGLK RELAALTTQI GNDKLKGWIL DLRNNPGGLL EEAVTVSDAF LDRGEIVSTR GRNAEETQRR AAHGGDLAKG KQVIVLINGG SASASEIVAG ALQDHKRATL VGTRSFGKGS VQTIIPLGSG NGALRLTTAR YFTPSGKSIQ AKGITPDIEV LQDVPDEIKS RTDTKGEASL RGHLKAEGDE KTGSQSYVPP EAKDDKALKM AADLLHGVKV NATAPATGDK AAIDKPAGKV EN
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