Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0163 |
Symbol | |
ID | 3971268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 178904 |
End bp | 179329 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637923276 |
Product | Iojap-related protein |
Protein accession | YP_530057 |
Protein GI | 90421687 |
COG category | [S] Function unknown |
COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCAAGT CTTTAGCGTC GAACTCGGTC TTGCCGAAGA CGCGTAAAGC ATCGACTCCT GTCGCGGTCC TGACGGCGCG GCCAGACGCC GACGAGACTC TGAAGCTCAT CCTCTCCCGC CTCGACGACA TGAAGGCGGA AGAAACGGTC ACCATCGACC TTCGCGGCAA ATCCGCCTTT TCCGATTACA TGGTCGTCAC CAGCGGGCGC TCCAACCGCC ACGTCGGTGC GGTCGCGGAG AATGTCGTCA AGGGCCTCAA GGAGGCCGGC GTCAGCAGTC CGCATGTCGA AGGCCTGACC AATTGCGACT GGGTGCTGAT CGATTCCGGC GACGTCATCG TGCACGTGTT CCGCCCGGAA GTCCGCGCGT TCTACAATCT GGAGAGGTTG TGGACCCAGA TCCCGGCGGC CGCGAAGACG CTGTAG
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Protein sequence | MSKSLASNSV LPKTRKASTP VAVLTARPDA DETLKLILSR LDDMKAEETV TIDLRGKSAF SDYMVVTSGR SNRHVGAVAE NVVKGLKEAG VSSPHVEGLT NCDWVLIDSG DVIVHVFRPE VRAFYNLERL WTQIPAAAKT L
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