Gene RPC_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0163 
Symbol 
ID3971268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp178904 
End bp179329 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID637923276 
ProductIojap-related protein 
Protein accessionYP_530057 
Protein GI90421687 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCAAGT CTTTAGCGTC GAACTCGGTC TTGCCGAAGA CGCGTAAAGC ATCGACTCCT 
GTCGCGGTCC TGACGGCGCG GCCAGACGCC GACGAGACTC TGAAGCTCAT CCTCTCCCGC
CTCGACGACA TGAAGGCGGA AGAAACGGTC ACCATCGACC TTCGCGGCAA ATCCGCCTTT
TCCGATTACA TGGTCGTCAC CAGCGGGCGC TCCAACCGCC ACGTCGGTGC GGTCGCGGAG
AATGTCGTCA AGGGCCTCAA GGAGGCCGGC GTCAGCAGTC CGCATGTCGA AGGCCTGACC
AATTGCGACT GGGTGCTGAT CGATTCCGGC GACGTCATCG TGCACGTGTT CCGCCCGGAA
GTCCGCGCGT TCTACAATCT GGAGAGGTTG TGGACCCAGA TCCCGGCGGC CGCGAAGACG
CTGTAG
 
Protein sequence
MSKSLASNSV LPKTRKASTP VAVLTARPDA DETLKLILSR LDDMKAEETV TIDLRGKSAF 
SDYMVVTSGR SNRHVGAVAE NVVKGLKEAG VSSPHVEGLT NCDWVLIDSG DVIVHVFRPE
VRAFYNLERL WTQIPAAAKT L