Gene RPC_0155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0155 
Symbol 
ID3971260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp171562 
End bp172161 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content65% 
IMG OID637923268 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_530049 
Protein GI90421679 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.852319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAGG ACCTCCCGAC ATCCACGTTG CGCGAGACCA GTAGCTGCGT CCTCGAGACC 
GAACGGCTCG CCTTGCGCAA GCCGACGCTC GCGGACGTAA AATCTATCGC CAACCTCGCC
AAGGATCGCC GGGTCGCGGA AAACACCCGC AGGCTGCCGC ATCCCTATCG GCTGGACGAC
GCGACGCGCT TCATCAAGGC GCTGGCCGAG ACCGGCAACG AGACCGTGTT CCTGATCGAG
CTGGATTTCC GTCCGATCGG CGTGGTCGGC ATCGACTGGC GCGACCAGGA CGCGCCGGAA
CTCGGCTACT GGCTCGGCGT GGATTATTGG GGCCAGGGCT TTGCCACCGA GGCCGCGCGC
GCGGTGATCG ACTTCACCTT CGATGAGTTC GAGGACGTCG ATCAGTTGAT CTCCGGCGCC
CGGGTCGCCA ACCCGGCCTC GCGCAATGTG CTGGAAAAGT GCGGCTTCCA GTGGAGCGGC
GTCGAACTGC ACCGCTTCGA GGCGCTTGGC GGTTCGACCC CGGTGGACTG TTTCCGGCTG
AGCCGCGGGG TGTGGTCGTC GCTGAAGAGC TGGAGCAACT CGAAGAAGCG TCTGGTGTAG
 
Protein sequence
MLQDLPTSTL RETSSCVLET ERLALRKPTL ADVKSIANLA KDRRVAENTR RLPHPYRLDD 
ATRFIKALAE TGNETVFLIE LDFRPIGVVG IDWRDQDAPE LGYWLGVDYW GQGFATEAAR
AVIDFTFDEF EDVDQLISGA RVANPASRNV LEKCGFQWSG VELHRFEALG GSTPVDCFRL
SRGVWSSLKS WSNSKKRLV