| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0152 |
|---|
| Symbol | |
|---|
| ID | 3971257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 169135 |
|---|
| End bp | 170316 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637923265 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_530046 |
|---|
| Protein GI | 90421676 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACG ACACACTGAC GGCAACCGGC ATCGGCAACC ACGGCGCGAC GCGCCTGCCA
TCGGTGGAGG TCGACAGTTA CAATATCGAG CTCAAGGACG ATGAAGGCTT TCTCGGCGAC
CGCGCCAGCA GGGGGGCGTT CCAGAAGATC CTCGACGGCT GGCGCAAGCC GCTGCGCAAG
AACGGCGACG ACCCGTTCGG CAAGAAATCC ACCGAGGACA TCAACAAGCA TGAGCTCGAC
GCCATTCTGA CCGGCGACGA CGTCGGCGCG GTGGCGGTGG TGCACAGCGC GATCGAGGAA
TTCGCCCAGG AACTGGCCTA TGTGACCCGC CGCTTCATGA AGACCAAGGC CTGGGCCGGC
ACCGAATGCA TCGTGGTCGG CGGCGGTTTC CGGCAGAGCC GGCTCGGCGA ATTGGCGATC
GCCCGCACCG ACATCATCCT GAAATCCGAG GGCATCGCGG TCGATCTGGT GCCGATCCGC
TATCATCCCG ACGAGGCCGG GCTGATCGGC TGCCTGCATC TGGCGCCATC GTGGATCTTC
GAGGCCCACG ACAGCATCCT GGCGGTGGAC ATCGGCGGCT CCAACATCCG CTGCGGGGTG
GTCGAGACCC GCTGGAAGAA GGCCCCCGAC CTGTCGAAAG CGGTGGTCTG GAAATCAGAG
CTGTGGCGGC ACGCCGAGGA AGAGCCGACC CGCGAGGGCG CGGTGAAGCG GCTCGTCAAG
ATGCTCAAAG ACCTGATCGG CGCCGCCGAG GCCGAGGGCT TCAGGCTGGC GCCGTTCATC
GGGATCTCTT GTCCCGGTGT GATCAACGCC GACGGCTCGA TCGAAAAGGG CGCGCAGAAC
CTGCCAGGCA ATTGGGAAAG CAGCCGTTTT CATCTGCCGA CCAGCCTGAT CGAGGGCATT
CCGGTGATCG GAGACCATGA TACCGCGGTG CTGATGCACA ATGACGGCGT CGCCCAGGGC
CTCAGCGAAG TGCCGTTTAT GCAGCAGTTC GAGCGCTGGG GCGTCCTGAC CATCGGCACC
GGGCTCGGCA ACGCCCGATT CACCAACCGC AAACCCAAGG TCAAGAAAGA CAAGGACGTC
GAAAAGGCCA AGGAGAAGGA CAAAGAGGCC GACAAGGGGA AGAGCAAGGA TAACGAAAAA
GACAAAGACA AAGAGAAAAA GGACAAGAAA GACAAGGACT GA
|
|---|
| Protein sequence | MADDTLTATG IGNHGATRLP SVEVDSYNIE LKDDEGFLGD RASRGAFQKI LDGWRKPLRK
NGDDPFGKKS TEDINKHELD AILTGDDVGA VAVVHSAIEE FAQELAYVTR RFMKTKAWAG
TECIVVGGGF RQSRLGELAI ARTDIILKSE GIAVDLVPIR YHPDEAGLIG CLHLAPSWIF
EAHDSILAVD IGGSNIRCGV VETRWKKAPD LSKAVVWKSE LWRHAEEEPT REGAVKRLVK
MLKDLIGAAE AEGFRLAPFI GISCPGVINA DGSIEKGAQN LPGNWESSRF HLPTSLIEGI
PVIGDHDTAV LMHNDGVAQG LSEVPFMQQF ERWGVLTIGT GLGNARFTNR KPKVKKDKDV
EKAKEKDKEA DKGKSKDNEK DKDKEKKDKK DKD
|
|---|
| |