| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0142 |
|---|
| Symbol | |
|---|
| ID | 3971284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 157489 |
|---|
| End bp | 159177 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637923254 |
|---|
| Product | MutT family phosphoesterase |
|---|
| Protein accession | YP_530036 |
|---|
| Protein GI | 90421666 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4112] Predicted phosphoesterase (MutT family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.261415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATGGTCA CTTACGAAAA GCAAACTGTT TCGGAGGACA ATCGACCCGA CCAAGTCGAT
GTCGATGGGC AGACATATCT GCGCGTCGCC GAGACCGTCT TAGCCAAGGC GTTATCTCCT
CTGAAGGCGC GCGAAATCGT GGAACGCGGA ATCGAACAAG GGTTATTCGG CGATCACGTG
ATGGGCCGGA CGCCGGAGAA ATCGATGCAA GCTCGGCTTA GCATCGATAT CCTTACCCGC
GCAGGATTCT CCAGATTTTT CAGAACCGCT CGCGGCCGCT TCGCATTGCG TGCATCGGCG
AACAGTGAGT CAGAATCAGC GGAAGAATAC GTCGCTGAAA AGCGTGTCCT GAATTTACCC
AAAGAAGAAG TGCTTTGCGC GCCTGAAGCG AATTTCCGCG ATGTTCTGAC GTTCCAAGGT
ATCGATCCGG ACTCGGCTTC AATTCTCAAA CGCATATTGA CCTCGCACGA ACCCACATAC
ATTGCGCGAA CTGAGGCTGA GACGCGCGAC GACGCAAAGC AATTCATCAC TTACGTGCTC
GTTCAGTGCG GTGAGCGGCT TTTATTCTTT AGGCGATCTT ACCTAAGCCG CGCCGCCGAA
TTTCTGCGCG GTTCGAAATG CATTGGCTTT GGCGGTCACG TGAGCGCGGC CGATGTCGAT
ATGTGGTCGC GCGAAGACTA TGGTCTTGCG GCATGTGCGC GTCGCGAGTT GGCAGAAGAA
ATTTCGTTGC AAGATCGTTC TGCAAACCAA GTGGCAAACA ATCGCGCGAC CATACGCCTC
TTCCAAGACG TTCCTCTTGA GCGGCTCGGT ATCTTGAACG ACGACTCGTC GGAGGTTGGA
CGCCGACACG TCGCTGTAGT CTATCGCGCT TGGATTTCTG ATTGGAACGT CGCCAAGAAG
TTGATGAAGG GTGATTCTTC GATCAAGGGC ATTAGCTGGA TCGACTTGTC TAAAGACACT
TTGGACATTG CGGATTTTGA GTATTGGTCG CAGTTGTGTT TGCGGAAGTT TTATCCATCA
ACGCTCATTG CGAAGGCGCG TCTTCAAGTT CTCAATAGCT CGCGCTTGAC CAAGGATCAC
CTCCTTGTCG TGGCAGGGCG CGTTGGTTCA GGAAAATCCG AAACCTCGAC GTATCTGGGC
GAGCGTCTGT CGCATCCAGT AATCCGCACT GGCGAACTCG TACGCACGTT GATGAACGCC
CCATCGATTA CCGAAATTGG ACGCGAAGAA TTTCAGAAGC GCGCTTTTGA ATTCATCACC
GGGCCGAACG GTCCTAATAG ACTCGCGCAA GCGATCCTTA GGCAGGTTAC GAACAACGGC
GGCCGACCTT GCATCGTTGA CGGCGTCCGA AATTTGCAAA CATTCGAGAA GCTTGAATCA
CTTTATCACG GCGGCGATAT TGGATTGATC TATATCCAGA CGCCGCCTGA CGTTGCGTTT
GACATGTACC GCGCGCGAGA AGCACAAGGC ACGTTGTCAT TTAGCTACCG AGACTTCTTG
AAGGTTTATG ACGCTCCGGT TGAATCGGAG ATCACAAGTC TGGGCCGCAA GGCGCACGCG
ATTGTCTACA ATTCGTTCGG CATGGAAGCG TTCCGGCGAA CTCTCGACGA CTTCGTCTCA
CTAAATCTAA AGACGCCTAT CGCGCCGGTT CATGTCATAG AGCCGGGAAG AGTGAAGGTT
CGTTCTTAA
|
|---|
| Protein sequence | MMVTYEKQTV SEDNRPDQVD VDGQTYLRVA ETVLAKALSP LKAREIVERG IEQGLFGDHV
MGRTPEKSMQ ARLSIDILTR AGFSRFFRTA RGRFALRASA NSESESAEEY VAEKRVLNLP
KEEVLCAPEA NFRDVLTFQG IDPDSASILK RILTSHEPTY IARTEAETRD DAKQFITYVL
VQCGERLLFF RRSYLSRAAE FLRGSKCIGF GGHVSAADVD MWSREDYGLA ACARRELAEE
ISLQDRSANQ VANNRATIRL FQDVPLERLG ILNDDSSEVG RRHVAVVYRA WISDWNVAKK
LMKGDSSIKG ISWIDLSKDT LDIADFEYWS QLCLRKFYPS TLIAKARLQV LNSSRLTKDH
LLVVAGRVGS GKSETSTYLG ERLSHPVIRT GELVRTLMNA PSITEIGREE FQKRAFEFIT
GPNGPNRLAQ AILRQVTNNG GRPCIVDGVR NLQTFEKLES LYHGGDIGLI YIQTPPDVAF
DMYRAREAQG TLSFSYRDFL KVYDAPVESE ITSLGRKAHA IVYNSFGMEA FRRTLDDFVS
LNLKTPIAPV HVIEPGRVKV RS
|
|---|
| |