Gene RPC_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0135 
Symbol 
ID3971277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp148605 
End bp149711 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content53% 
IMG OID637923247 
Producthypothetical protein 
Protein accessionYP_530029 
Protein GI90421659 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTGA TGCCACCGTC CCTTGGGGTA TACGGGCCGG GTCCTCGCGA TAGGTCCGGC 
GTTGCTACAT ACATCGCCGA AAGTCTCGAG CATCTTCAAC CATTCTTCCG GACGCACTGG
GTGGCGAATG GCGAGACTTG GATATCACCC AATCAATTCG ACTATGCGCT CTATCACATT
GGCAACAATG AACTTCATCG AAGCTCACTT CGTGCGGCGA TGCTTCGCCC GGGCGTGTCG
CTTCTGCACG AATATTTGCA CCTAGACTTG TATTTTCAGG TTTGGGAAGA TATCAGCGAA
GCTCGACAGC GGGAGATACT TTCAGAACTA GCGCGAAAGA GCGGTCTATC GGCGCGCTCT
GCATCGCACT TCGTTGAGCA GGCCAACGCC CGAGGTATCG ATCCCTACGC TATCGATATT
GGCATAGAAC GATATGTTGT TGAAGCGTCT AAGGTCGGCT TGGTCCATTC AAGCGGAGTA
GCGCAGCGCC TGAGAGAGCG GTATCGTCGA AGTCAGATTG AAGCCGTGCC TTTTCCGGTG
AGGCCGTGGG GTGACTACGA CAGATCGATT CCCGAAAAGT TCGGTATCCA TAAGAATATG
TTTGTCTTCG GAGCGTTTGG CTTTATCGGC GAATACAAGT GCATCCCCCT TATATTGGAT
GCTTGGCAAA ATTGGCGCGG CAAACCTGCC AATGTTGTGT TATTGCTTGC TGGTGAAAGA
CAGTTTACGA TTAATACAGA GTTCGAAGGG GTTATCGAAA CGGGTTGGCT GGACAGCCAG
ACGTTCAACG CGCTTATTCA GCGCACCGAC TGCGGCGTCC AATTGCGGAA ACCAAGTCTC
GGAGAAACAT CGGGACCGGC CGCAGCTTTC TGCGCTCACA ATCGACCAGT GGTACTCAGC
GATACTCCGG AGATGCGCGG GATCGGTATC GGCAAGAATG CACGTTTCCT GAACGTAAAT
GCAGGCAACG AGGAGCTGCT TGCCCTGATG CAGGCTCTCT ACGAAGGCCG TGGCGATAAA
CGAGCTGGAT ATATTGAGGA GTTCGCGTGG TCGTTATGGG CCAAGAGAGT ACACTCCTGC
GTCACTGGAG CGGCGATGGG GATATGA
 
Protein sequence
MRVMPPSLGV YGPGPRDRSG VATYIAESLE HLQPFFRTHW VANGETWISP NQFDYALYHI 
GNNELHRSSL RAAMLRPGVS LLHEYLHLDL YFQVWEDISE ARQREILSEL ARKSGLSARS
ASHFVEQANA RGIDPYAIDI GIERYVVEAS KVGLVHSSGV AQRLRERYRR SQIEAVPFPV
RPWGDYDRSI PEKFGIHKNM FVFGAFGFIG EYKCIPLILD AWQNWRGKPA NVVLLLAGER
QFTINTEFEG VIETGWLDSQ TFNALIQRTD CGVQLRKPSL GETSGPAAAF CAHNRPVVLS
DTPEMRGIGI GKNARFLNVN AGNEELLALM QALYEGRGDK RAGYIEEFAW SLWAKRVHSC
VTGAAMGI