Gene RPC_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0134 
Symbol 
ID3971276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp147454 
End bp148614 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content55% 
IMG OID637923246 
Productglycosyl transferase, group 1 
Protein accessionYP_530028 
Protein GI90421658 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGT TACTGATAGT CCCCAGCTTC CCACCGCGTA CCGGCGGCCT AGAAACTTAC 
GTTGCTCATT TGGCGGAAGC CCTTGCCGTC CAGGGTCACT CGATTGTGGT CCTTACCAAC
AGCGATCTTG AGGAACAGCC CGCGGTCGAG GAGCGATACG GTTACACAGT CTGGCGGACA
AGGGCATTGC TGGCTGGTCA CGGGCACGAG AATTATGTTC CGTGGGAGAG ATCATATTTT
GCGTTGTTAA ACGACATCGC AGACTTTGCG TCGGATGCGC AATTCGATGT TGTCCATTGC
CATACACAAG TATCACTCTT GATTGCGCAT TTAAGCGGAC TCTCTCAGAG GTTTCCGATC
GTGGCGTCCT TTCACGAGAC CAACCCTCTC CGCGACAAAC TAGGCGAACA ACGAACAAAA
TTCATAGTTC GTCGGTGTCC GGCTGCCAGA TACGCGGTCG GTAGCGAGGC CTTTGCTGCG
CAAGCGCGCT CGTTTGGAAT AGAAGATGAA TTGATCAGAG TGGTGCGCAT GGGTATCCGC
GACAGACATC ACACGGATCG CGATGTCGCG CGGCGAGAAC TGAGCATGCG GTATGGCGTA
TCCACAGAAC GCATTCTGAT CACGCTGTTA GGGCGCTTCA CGCCGAGGAA GCAACACGAG
CAAGCGCTGT TGGCCCTCGA GCGTATGCAC CAGCGTCACA ATGTGCAATT GCTGTTCGCT
GGTTCTGACA ACAGCACCGA TCCCGTGTTC GTGCGCCAGC TGCGTCGGGT TGCGGCGGCA
GCAGCTCCTA GCGTGATCTG GCTTGAAAAT ATCCCTGACG CCGATCGAGA TCTACTTGTA
GATGCCACTG ACCTCGGTCT GCAGCCGAGT AGCAAGGAAG GGTTAGGGCT GGCGGCTATA
GAATTTATGA TGGCCGGCGT CCCGATTCTG GTCTCGGATA TAGAAGGCCT TCGTGAGGTC
GTAGGTGAGC ATACGACGTG TCTGGTCGAT GCCAACTCGG TCGAGCATTT GGCGCGACGG
ATAGATAAGT TGGTTGTGAA CGTACAGGAG AGGGCGACCC TTGGTAGGCA ATTGCAGCAG
CGCGCAAGTA TGGAATTGTC GATTGAACAA GCGGCGGTAC GAACGCTCAG TGTTTACGCT
GAGGCCCTTT CATGCGAGTG A
 
Protein sequence
MKVLLIVPSF PPRTGGLETY VAHLAEALAV QGHSIVVLTN SDLEEQPAVE ERYGYTVWRT 
RALLAGHGHE NYVPWERSYF ALLNDIADFA SDAQFDVVHC HTQVSLLIAH LSGLSQRFPI
VASFHETNPL RDKLGEQRTK FIVRRCPAAR YAVGSEAFAA QARSFGIEDE LIRVVRMGIR
DRHHTDRDVA RRELSMRYGV STERILITLL GRFTPRKQHE QALLALERMH QRHNVQLLFA
GSDNSTDPVF VRQLRRVAAA AAPSVIWLEN IPDADRDLLV DATDLGLQPS SKEGLGLAAI
EFMMAGVPIL VSDIEGLREV VGEHTTCLVD ANSVEHLARR IDKLVVNVQE RATLGRQLQQ
RASMELSIEQ AAVRTLSVYA EALSCE