Gene RPC_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0129 
Symbol 
ID3971310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp143017 
End bp144192 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content56% 
IMG OID637923241 
Productmannosyltransferase-like 
Protein accessionYP_530023 
Protein GI90421653 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG5020] Mannosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGGC GAAATGATGG GCCATCCGCC ACGAAGCCGT CAGGGATAAG GACGACCAAT 
TGTTCTCGTG ATCTCTCGCG CGAATGGCAA TCAAATGCTA TGTTCGTAGG TACGATGCCA
GCTAAAGCAG CAATTGTGTG CCTCACTCAG AATACGCCGA CGCGTGTGAG TTTTTTGCGT
GGGTCGCTGA CGCGGTTGTT TGAAGCATTC AATGCACGTG CGGGCTATCC AGTGCTTATC
TTGCATGAAG GCGATTTCGC CGCTCACGAG CAAGACGACT TGCGGCGAAC GCTCGGAGGT
GACCGAGGCG ACGCTCTGCA GTTCATTGAG CTGGAGCCGG ACGATTTCCT TGCGCCGGAT
TGGGTATCTG AGGGAGTCGT TCGCGCGCAT CAACGCGTCG TTCCTGACGC GCCAGGTGTG
CAATACAGAA CCATGACCCG CTGGTGGCTT CGCGATCTAC CTAAGTATCT TTCGGAATAC
GATGTCTACA TGCGACTCGA CGACGATGCG TACCTGGATG AGGCAATCGG CGATCCAATC
GCGTCCGTCC TAGAGTCAGG TGTAGATTAC GCGTCAAATT GCGTACACAT CGAACATCCG
ATGAATGCAT TGGGGCTCGC CGATCTTTGC CGACGATTGA TCGGCGAGAG CGCTCGTTTG
AGCGGGCTCT TTGTGACGGG TGAGCACGGA CCCGAAAACT GTGCGCTTAG GTCGTTCGTC
GCCGGTCTGC CCTCTCATTT GAAGAGCTTG GTCTCTACTG ATAGGCTGGA AGCGCCGATT
ATGTATTACA ACAACTTTCA CGTCGCTCGG CGCTGCGTAT GGGAGAGTAA GCCGCTGCGT
GACTTCTATA GCGGGATTGA CGAGAGCGGC GGCCAATATT TGCTCCGCTG GGGCGATGCG
CCCATTCAAA CGATCGGCGT CGTCGCGCTG GGGTTCGCCA TCGGAAGGTT GGAGTTTCGG
TATTCGAAGC GACATGAGCG CGCGGACGGA GCTTTCGTAA ACTGTAACCA CGAGCTTGCG
TCGCCGTTCA TGGACGCAAG TGTAGACGTC AACGCGCCGA AAGCTGGGAG CTTGACCGAA
TTCGACGCTT TCAATCGGAT GCTGCAACGC AGAGGCATCG CTGATATAGG TCGCAGGATA
GGAAAACACG ACGCCAAAGG CCGGACCGAT GGATGA
 
Protein sequence
MRRRNDGPSA TKPSGIRTTN CSRDLSREWQ SNAMFVGTMP AKAAIVCLTQ NTPTRVSFLR 
GSLTRLFEAF NARAGYPVLI LHEGDFAAHE QDDLRRTLGG DRGDALQFIE LEPDDFLAPD
WVSEGVVRAH QRVVPDAPGV QYRTMTRWWL RDLPKYLSEY DVYMRLDDDA YLDEAIGDPI
ASVLESGVDY ASNCVHIEHP MNALGLADLC RRLIGESARL SGLFVTGEHG PENCALRSFV
AGLPSHLKSL VSTDRLEAPI MYYNNFHVAR RCVWESKPLR DFYSGIDESG GQYLLRWGDA
PIQTIGVVAL GFAIGRLEFR YSKRHERADG AFVNCNHELA SPFMDASVDV NAPKAGSLTE
FDAFNRMLQR RGIADIGRRI GKHDAKGRTD G