| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0112 |
|---|
| Symbol | |
|---|
| ID | 3971293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 127267 |
|---|
| End bp | 128250 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637923228 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_530010 |
|---|
| Protein GI | 90421640 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTGC CAGCTATTAC TTCGCCTAGA CCGATCGTGA TCGCGAATCG GTTCTCCATC
GGCCTGCTTG GATTAGCGGG GCTGCTGTTC GTCGCCGTGC TGATTTACGG CGGCTACCTG
CTCACGGTGA TGCAGCTCGC GATGATCTAC GGGATCTTCT GCCTCGGGCT GAATTTCTTC
ATGGGCTACA CCGGGCAGGC TTCGTTCGGT CAAAACGCCT TCGCCTGCAT CGGCGGCTAC
GGCAGCGCGA TCCTCAGCGT GCAATACAAT TGGGAACCTG GGCTCGCGCT GCTCGCCTCG
ATGGCGGTCG CCGGCGTTGC CGCGCTGCTG ATCGGCTATC CGACGCTGCG GCTGCGCGGC
CACTATCTGG CGATGGCGAC TTTCGCGCTC GGACTGATCA CCTACGACAT CACCGTGCAA
TGGACCAGCC TGACGCAGGG CTACATGGGC TATGCTGGCA TCCCGCCGCT CGGCGTCGGC
AGCTTCACCG TCGAGGACGA GCGGATGAAG TTAATTTGTC TTGGGCTGCT GCTGCTGTTC
GCGTTCTGGA TTTCGCAGCG GCTGCGCGAT TCGCGGTTCG GGCGGGGATT GCGGGCGATC
GCCGGCAGCG AGGACGGCGC CTCCGCGCTT GGCATCCGGA TCTCGCGGTT CAAGCTGATC
GCCTTCGTGA TCGCAGCCCT CTACGCCTCG GCCGCCGGCT CGCTGTTCGC CCACACCGTC
GGCTTCATCA GCCCCGAGGT GTTCGGCCCG CAGATGGTGA TCGTCACCTT CACCATGCTC
TATGTCGGCG GCGTCGGCAC GATGATCGGC CCGGTGATCG GCGCCATCGT GGCGTCGCTG
CTGCCGGAAT TGTTCCGCAG CACCGGCCGG TTCCAGGACA TCGCCTATGC GCTGGTGCTG
CTGGTGATGC TGATCTACGC GCCGAAGGGG CTGTCGGCGC TGGGCAGCCT GTTCCGGCCG
CGCGCCGACA AGGACGAGGT GTGA
|
|---|
| Protein sequence | MTLPAITSPR PIVIANRFSI GLLGLAGLLF VAVLIYGGYL LTVMQLAMIY GIFCLGLNFF
MGYTGQASFG QNAFACIGGY GSAILSVQYN WEPGLALLAS MAVAGVAALL IGYPTLRLRG
HYLAMATFAL GLITYDITVQ WTSLTQGYMG YAGIPPLGVG SFTVEDERMK LICLGLLLLF
AFWISQRLRD SRFGRGLRAI AGSEDGASAL GIRISRFKLI AFVIAALYAS AAGSLFAHTV
GFISPEVFGP QMVIVTFTML YVGGVGTMIG PVIGAIVASL LPELFRSTGR FQDIAYALVL
LVMLIYAPKG LSALGSLFRP RADKDEV
|
|---|
| |