| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0110 |
|---|
| Symbol | |
|---|
| ID | 3971330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 125611 |
|---|
| End bp | 126498 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637923226 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_530008 |
|---|
| Protein GI | 90421638 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.185553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAGCG GCGTCGAACT TATTCAGAGT CTGGTCAATG GTGTGGGGAT CGGCCTGATT
TATGGTCTGG TGGCGATCGG CTTCTGCGTC ATCTACAACG CCAGCGGCAT CGTCAATTTC
GCCCAGGGCG TGTTCGTGAT GCTCGGCGGC ATGTTCGCGC ATGCGCTGCT GACGCAGTTC
GGCCTGCCGA TGTATCTGGC GGCGGCGCTG TCGATCGTGC TGGTGGCCGG GGTCGGCGTG
CTGGTGCAGA TCTTCGTCAT CAATCCGATG TGGCGGCGCA AGGCGCCGCT GTTCGCCATC
ATCCTGGCGA CGCTGGCGAT CCAGCTGCTG ATCGAGCAGG TGGTGATCCT CACGCTCGGC
GACCAGCCGC GCACCTATCC GGAATTCACC TCCGGCGGCC CGCTGAAGAT CGGCCCGATC
GCGATCGGCT ATCAGTTGTT CTGGGTGCTC GGCTGCGGCG CCGTGATGGT GTTCGCGCTG
ACGCAGTTCT TCAACCGCAC GCGGATCGGC CGCGCGCTGC GCGCCTGCTC GCAGAACCGC
GAGGCGGCGG CGCTGCTCGG CATTCCGGTG GAGCGCATGC TGATCCTGGC CTTCGCGCTG
TCCTCGGCGC TCGGTGCCGC GGCCGGCATC CTGATCACGC CGACGCAATA CACCGCCTAC
AGCGTCGGCG CGCCGTTCGG CATCAACGGC TTCATCGCGG CGATCATCGG CGGCTTCGGC
AGCGCCTCGG CCGGGCTGGT CGGCGGCATC CTGCTCGGCG TCATCCAGTC CGGCGCGATC
GTGTTCTTCG GCGCCGGCTT CAAGAACGTC ATCGCCCTGA CGATCCTTCT CGTCGTGCTG
CTGTTCTTCC CGAACGGGCT GTTCGGCGGC CGGGCCAAGA AGGCGTAG
|
|---|
| Protein sequence | MPSGVELIQS LVNGVGIGLI YGLVAIGFCV IYNASGIVNF AQGVFVMLGG MFAHALLTQF
GLPMYLAAAL SIVLVAGVGV LVQIFVINPM WRRKAPLFAI ILATLAIQLL IEQVVILTLG
DQPRTYPEFT SGGPLKIGPI AIGYQLFWVL GCGAVMVFAL TQFFNRTRIG RALRACSQNR
EAAALLGIPV ERMLILAFAL SSALGAAAGI LITPTQYTAY SVGAPFGING FIAAIIGGFG
SASAGLVGGI LLGVIQSGAI VFFGAGFKNV IALTILLVVL LFFPNGLFGG RAKKA
|
|---|
| |