Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0094 |
Symbol | |
ID | 3971314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 106054 |
End bp | 106794 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637923210 |
Product | two component transcriptional regulator |
Protein accession | YP_529992 |
Protein GI | 90421622 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA ACCCCAACAT CATCGTCGTC GACGACGAGG CGCCGGCCCG CGAAATGGTC GGCGATTATC TGAAGATGCA CGGCTTCACC GTGACGCTGT GCGACGGCGG CGCCAGCCTG CGGGCGGCGA TCGAAATCGC GGTGCCCGAC CTCGTGGTGC TCGACCTCAA CATGCCCGAA GAGGACGGGC TGTCGATCAT CCGCGATCTG AAGGCCCGCA CCAACGTTCC GGTGATCATG CTGACCGCCA CCGCGAGCCC GATCGATCGC GTGGTCGGGC TCGAACTCGG CGCCGACGAC TACGTCGCCA AGCCGTGTGA GTTGCGCGAA TTGATGGCGC GGATCCGCTC GGTGCTGCGG CGGAGCGCCC CGGCGAAGCC GGCGCCGGCG CCGGTGGCGG CGGCGGTCAT GCCGGCCAAG GAGCATCTGG TGCGGTTCGG CACCAAATGG CTCGACCTCG AGGCGCAGGC GCTGCGCGAC GACGACGGTA ACGAGCACCC GTTGACGGCG TCGGAATTCG GCCTGCTGAA AGTGTTCGCC GCCAATCCCA AGCGGGTGCT GTCGCGGGAA CGGTTGCTGG AATTGGCCAA TGCCCGCGAT GCCGAAGCCT TCGACCGCGC CGTCGACCTG CGGATCATGC GGATCCGCCG CAAGATCGAG GCGGACCCCA CCAAACCGGC GGTGATTCGC ACCATCCGCG GCGGCGGCTA CCTGTTTTCG CCCTCAGGCG AGCGCGCCTG A
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Protein sequence | MSQNPNIIVV DDEAPAREMV GDYLKMHGFT VTLCDGGASL RAAIEIAVPD LVVLDLNMPE EDGLSIIRDL KARTNVPVIM LTATASPIDR VVGLELGADD YVAKPCELRE LMARIRSVLR RSAPAKPAPA PVAAAVMPAK EHLVRFGTKW LDLEAQALRD DDGNEHPLTA SEFGLLKVFA ANPKRVLSRE RLLELANARD AEAFDRAVDL RIMRIRRKIE ADPTKPAVIR TIRGGGYLFS PSGERA
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