Gene RPC_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0088 
Symbol 
ID3971346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp99734 
End bp100405 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID637923204 
Producthypothetical protein 
Protein accessionYP_529986 
Protein GI90421616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.498901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGA TCCCCGTCGA ATTCGGTAAA CAAGCACGCG GCGACAGCGA CGGCCGGCTC 
GACGCCGCCG CGTTTCACCG CAACCATGCG CCGATCTGGG AGGCGCTGGC GCCCTTGCTC
GGCGAACAGT CCGGCGAGGT GCTGGAGGCC GGCAGCGGCA CCGGCCAGCA TGTCATCGCC
TTCGCGCGGC AGAGCCCGAA CCTCATTTGG TGGCCGAGCG ATTTCAATCC GGCGCATCTC
GCCAGCATCG CCGCCTGGCG TACGCAGGCC GGGCTCGCCA ATGTCCGTGA GCCGCTGTCG
ATCGACCTGT CCGATCCCGC CTGGTGCCCG CAGTTGCAGG ACGGCAGCGG CCCCGGACCG
CTGCTCGCGG TGTTTTCCGC CAATGTGGTG CACATCGCGC CGTGGCGCGT CGCCGAAGGA
CTGTTCGCCG GCGCGGCGCG CTACCTGCGC CCCGACGGCC GGCTAATCCT ATACGGCCCG
TTCAAGCGCG ACGGCGCTCA CACCGCGCCG AGCAACGCCG CGTTCGACCA CAGCCTGCGC
GCCACCAACC CCGACTGGGG CGTGCGCGAT CTCGCCGAGC TCGAAGCGCT CGGAAGCGCC
CACGGCTTGA TCTTGAGCAA CATCATCGAA ATGCCGGCGA ATAATCTGCT GCTGGTGTGG
TCGCGTGGCT GA
 
Protein sequence
MPEIPVEFGK QARGDSDGRL DAAAFHRNHA PIWEALAPLL GEQSGEVLEA GSGTGQHVIA 
FARQSPNLIW WPSDFNPAHL ASIAAWRTQA GLANVREPLS IDLSDPAWCP QLQDGSGPGP
LLAVFSANVV HIAPWRVAEG LFAGAARYLR PDGRLILYGP FKRDGAHTAP SNAAFDHSLR
ATNPDWGVRD LAELEALGSA HGLILSNIIE MPANNLLLVW SRG