Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0088 |
Symbol | |
ID | 3971346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 99734 |
End bp | 100405 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637923204 |
Product | hypothetical protein |
Protein accession | YP_529986 |
Protein GI | 90421616 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.498901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGA TCCCCGTCGA ATTCGGTAAA CAAGCACGCG GCGACAGCGA CGGCCGGCTC GACGCCGCCG CGTTTCACCG CAACCATGCG CCGATCTGGG AGGCGCTGGC GCCCTTGCTC GGCGAACAGT CCGGCGAGGT GCTGGAGGCC GGCAGCGGCA CCGGCCAGCA TGTCATCGCC TTCGCGCGGC AGAGCCCGAA CCTCATTTGG TGGCCGAGCG ATTTCAATCC GGCGCATCTC GCCAGCATCG CCGCCTGGCG TACGCAGGCC GGGCTCGCCA ATGTCCGTGA GCCGCTGTCG ATCGACCTGT CCGATCCCGC CTGGTGCCCG CAGTTGCAGG ACGGCAGCGG CCCCGGACCG CTGCTCGCGG TGTTTTCCGC CAATGTGGTG CACATCGCGC CGTGGCGCGT CGCCGAAGGA CTGTTCGCCG GCGCGGCGCG CTACCTGCGC CCCGACGGCC GGCTAATCCT ATACGGCCCG TTCAAGCGCG ACGGCGCTCA CACCGCGCCG AGCAACGCCG CGTTCGACCA CAGCCTGCGC GCCACCAACC CCGACTGGGG CGTGCGCGAT CTCGCCGAGC TCGAAGCGCT CGGAAGCGCC CACGGCTTGA TCTTGAGCAA CATCATCGAA ATGCCGGCGA ATAATCTGCT GCTGGTGTGG TCGCGTGGCT GA
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Protein sequence | MPEIPVEFGK QARGDSDGRL DAAAFHRNHA PIWEALAPLL GEQSGEVLEA GSGTGQHVIA FARQSPNLIW WPSDFNPAHL ASIAAWRTQA GLANVREPLS IDLSDPAWCP QLQDGSGPGP LLAVFSANVV HIAPWRVAEG LFAGAARYLR PDGRLILYGP FKRDGAHTAP SNAAFDHSLR ATNPDWGVRD LAELEALGSA HGLILSNIIE MPANNLLLVW SRG
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