| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0080 |
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| Symbol | |
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| ID | 3971337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 90488 |
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| End bp | 91141 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637923196 |
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| Product | ABC transporter related |
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| Protein accession | YP_529978 |
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| Protein GI | 90421608 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCG TGCGCGCGCT GGCGAAATCC TATCGCTCCG GGCAAGACCG CGTCAGCGTG
CTGCGCGGCG TCGATCTTGA TGTCGCGGCC GGCGAGAGCG TGGCGCTGAC CGGGGAATCC
GGCAGCGGCA AGAGCACGCT GCTGCATCTG ATCGCGGGCC TCGACGCCGC CGACGCCGGC
GCGGTGCGGT TCGGCGACAC GCTGATCTCG CAACTCTCCG ACACCGGCCG CGCCGCGTTC
CGCCGCGACC GGCTGGGCCT GGTGTTCCAG CAATTCAACC TGATCCCGAG CCTCAGCGTC
GCCGACAATC TGGCATTTCA ATCGCGCATC GCCGGCCGCC ATGACGCGGT GTGGCAGGCC
GAACTGGTCG AGCGGCTCGG GCTGGGTAGC CTGCTGAAGC GCTATCCGGA GCAACTCTCC
GGCGGCCAGC AGCAGCGCGT CGCGATCGGC CGGGCGTTGG CGGTGAAGCC GCTCTTGCTG
CTCGCGGATG AACCGACCGG CAATCTCGAC GAGGCCACCG CCGACGAGGT GATGTCGCTT
GCGCGCGACC TGGTCAGCCG CACCGGCTGC GGCTTCCTGA TGGTGACGCA TAGTGCGCGA
CTCGCCGCCA TGCTCGATCG CCAGGTGCAT CTGCATGCCG GGCTGATCGC GTGA
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| Protein sequence | MLSVRALAKS YRSGQDRVSV LRGVDLDVAA GESVALTGES GSGKSTLLHL IAGLDAADAG
AVRFGDTLIS QLSDTGRAAF RRDRLGLVFQ QFNLIPSLSV ADNLAFQSRI AGRHDAVWQA
ELVERLGLGS LLKRYPEQLS GGQQQRVAIG RALAVKPLLL LADEPTGNLD EATADEVMSL
ARDLVSRTGC GFLMVTHSAR LAAMLDRQVH LHAGLIA
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