| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0079 |
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| Symbol | |
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| ID | 3971336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 88026 |
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| End bp | 90491 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637923195 |
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| Product | hypothetical protein |
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| Protein accession | YP_529977 |
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| Protein GI | 90421607 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACGCG CGCTGTGGGT TCTGGCGGTG CTGCTCAGCC ATTGGCGAAG GCATCCGCTG
CAGCTCGCCA CCCTGCTGGT CGGGCTGATT TCCGCGACCG CGTTGTGGAG CGGTGTGCAG
GCGCTGAACC AGCAGGCCCG GGTCAGCTAT GATCGCGCCG CCTCCGCGCT CGGCGGCGCC
CGCACCGCCA CGCTGGTCGG CCGCGACGGC GAGACCCTGG CGCAGCACAT CTTCGTCGAT
CTGCGCCGCG CCGGCTGGCC GGTGTCGCCG CTCGTGGAAG GCCGTATCCA GATCGGCGGC
CGATCATTGC GGCTGCTCGG CGTCGAGCCG CTGTCGCTGC CGATCGAGGC CAGCGCCGCG
CCGGCGATCG GCACCTCGGG CCTGCAAGGA TTCCTATCGC CGCCGGGGCA GGCGCTGATC
GCGCCGGACA CTTTGGCCGA ACTCAAGGCC GCGGCCGGCG ACACCCCGCA GACCAATAGC
GGCGCGACGC TGCCGCCGTT GACGCCGCAG AATGAACTGG TGCCGGGCCT GCTGGTGGTC
GACATCGGCG TGGCGCAGCG TCTCCTCAAC ATGCCGGACA AGATCTCGCG GCTGCTGCTC
GGCCAACGCG ATCTCGGCCC GCGCGCGCCG CTGGCGAGCG TCGCCGGCGA TACGCTGCGG
CTGGTCGAGC CCGATGCCGA GACCGATCTG GAGCGGCTGA CCGACAGTTT CCACCTCAAC
CTCACCGCGT TCGGGCTATT GTCGTTCCTG GTCGGGCTGT TCATCGTCAA TTCGGCCATT
GGCCTCGCCT TCGAGCAGCG CCGGCCGATG CTGCGCACGC TGCGCGCCTG CGGCGTCTCG
GCCTTTCAGC TCAATAGCGT GCTGATCGTC GAATTGGTGG CGCTGGCGCT GCTCGCCGGA
TTGATCGGTC TGGTGTGCGG TTACTTCATC GCCGCGACGC TGCTGCCCGA CGTCGCCGCC
AGCCTGCGCG GGCTGTACGG CGCGCAGATT CCCGGCCAAT TGAGTTTGCG CCCGCAATGG
TGGGCGGCCG GCATTGCGAT CAGCGTGATC GGCGCGCTGG GTGCCGCATC CGCCAGCCTG
TTGAAAGCGA TCCGGCTGCC GGTGTTGGCG GCGGCGCAGC CTTACGCCTG GCAGCAGGCG
CAGCAGACCG CGCTCGTCGT GCAGGGCGCG CTGGCGCTCT TGGTATTCGC TGGCGGCCTC
GGCTGTTTGC TGCTCGGCGA TTCGCTAGTG GCGGGCTTTG CGGTGCTGGC GGCGATCCTG
CTCGGCGCGG CCTTGGCGCT GCCGGCGGTG CTGGGATTGG TGCTGCTGAT CAGCGAGCGC
GCCGCGCGAA AACCGCTGAG TAAATGGTTC TGGGCCGACA GCCGGCTGCA ACTCTCCGGG
CTGTCGCTGG CGCTGATGGC GCTGCTGCTG GCGCTCGCGG TCAATGTCGG CGTCGGCACC
ATGGTGCAGA GCTTCAGCAA GACCTTCACC GGCTGGCTCG ACGGCAGGCT CGCCGCCGAG
GTCTATCTCA ACGCCGCGAG CGACGCCCAG GCGGGCGAGA TCAAGGCTTG GCTACGGGAT
CGCCCCGAGG TGCAGGCACT GCTGCCCGGC AGCCGCGCCG AGGCGCAGCT CGGCGGCTGG
CCGATCGAAC TGATCGGCTT TGCCGACCAC GCCACCTATC GCGAGCAATG GCCGCTGCTG
GAATCGACCG CCAATGCCTG GGACCTTGTT GCGCGCGGCG AGGCGGCGCT GGTCAGCGAA
CAGCTCGCGC GGCGGCTCAA GCTCAAGCTC GGCGATCGCG TGCAGGTGCC GACGCCGCAA
GGCCCTTGGC CGCTCGACGT GGCGGCGATC TATGCCGACT ATGGCAATCC GCGCGGCCAG
CTCGGCGTCG CCATCGCGCC TTTGGTGGCG CATTTCCCCG GCATCGCGCA GACGAGATTC
GGCCTGCGCG TGACGCCCGC CGCGGTGCCG GCGCTGGTCA CGGCATTGCG GGAAAAATTC
GCGCTGGATA ATCGCAGCCT CGCCGACCAG ACCGCGCTGA AGGCGGAATC GCGAAAAATC
TTCAACCGCA CCTTCGCGGT GACCAACGCG CTGAACGCCT TCACGCTCGG CATCGCAGGC
GTGGCGCTGT TGACTAGCCT CCTGACGCTG AGCCAGTCGC GGCTGCCGCA GCTGGCACCG
TTATGGGCGA TCGGCATTAC GCGTCGGAAA CTCGCGCTGA TCGAACTGAT GAAGACGCTG
TCGGTGGCGC TGATCACCGC GCTGCTGGCG CTGCCGCTCG GGTTGGTGGT CGCCTGGTGC
CTGATCGCGG TGGTGAACGT CAAGGCGTTC GGCTGGCGGC TGCCGTTCCA GGTGTTTCCC
GAACAGCTCG TGCAATTGCT CGGTATCGCG ATGCTGGCGG CGTTGCTCGC AGCACTGCTG
CCGATCCTGA AACTGCTGCG GATGCAGCCG GCAGAACTCG TGAAGGTGTT TGCCGATGAG
CGATAG
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| Protein sequence | MKRALWVLAV LLSHWRRHPL QLATLLVGLI SATALWSGVQ ALNQQARVSY DRAASALGGA
RTATLVGRDG ETLAQHIFVD LRRAGWPVSP LVEGRIQIGG RSLRLLGVEP LSLPIEASAA
PAIGTSGLQG FLSPPGQALI APDTLAELKA AAGDTPQTNS GATLPPLTPQ NELVPGLLVV
DIGVAQRLLN MPDKISRLLL GQRDLGPRAP LASVAGDTLR LVEPDAETDL ERLTDSFHLN
LTAFGLLSFL VGLFIVNSAI GLAFEQRRPM LRTLRACGVS AFQLNSVLIV ELVALALLAG
LIGLVCGYFI AATLLPDVAA SLRGLYGAQI PGQLSLRPQW WAAGIAISVI GALGAASASL
LKAIRLPVLA AAQPYAWQQA QQTALVVQGA LALLVFAGGL GCLLLGDSLV AGFAVLAAIL
LGAALALPAV LGLVLLISER AARKPLSKWF WADSRLQLSG LSLALMALLL ALAVNVGVGT
MVQSFSKTFT GWLDGRLAAE VYLNAASDAQ AGEIKAWLRD RPEVQALLPG SRAEAQLGGW
PIELIGFADH ATYREQWPLL ESTANAWDLV ARGEAALVSE QLARRLKLKL GDRVQVPTPQ
GPWPLDVAAI YADYGNPRGQ LGVAIAPLVA HFPGIAQTRF GLRVTPAAVP ALVTALREKF
ALDNRSLADQ TALKAESRKI FNRTFAVTNA LNAFTLGIAG VALLTSLLTL SQSRLPQLAP
LWAIGITRRK LALIELMKTL SVALITALLA LPLGLVVAWC LIAVVNVKAF GWRLPFQVFP
EQLVQLLGIA MLAALLAALL PILKLLRMQP AELVKVFADE R
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