Gene RPC_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0076 
Symbol 
ID3971333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp84752 
End bp85234 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content63% 
IMG OID637923192 
Productflavodoxin FldA 
Protein accessionYP_529974 
Protein GI90421604 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID[TIGR01752] flavodoxin, long chain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.326568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA ACGTCATCTT CGGCTCCGAC GGTGGTAACA CCAAGGCGGT CGCCTCCCGC 
ATCGCCAAAC ACATCCAGGG TCGCGCGATC GACATCAAGG CGGCGAACGT CGCCGACTTC
GAAAGCCCCA GCCTGCTGAT ACTCGGATCG CCGACCTACG GCGCCGGCGA TCTGCAGACC
GATTGGGAGG CGCATCTCGA CAAGCTGACC CAGGCCAAGC TCGCCGGCAA GAAGGTGGCG
CTGTTCGGCA CCGGCGACCA GGTCAGCTAC CCGGACTGCT TCGTCGACGC CATGGGCGTG
CTCTATGATT TGGTCGTCGA GCAGGGCGCT ACCGTGGTCG GCTTCACCGA GACCGCGGGC
TACGACTTCA CCGGCTCCAA GGCGGAGCGC GACGGCCAGT TCGTCGGCCT GGCGCTCGAT
CAGGACAGTC AGTCCTCCAA GACCGAGAAG AGGATTACCG AATGGGTCAG TCGATTGATT
TGA
 
Protein sequence
MSVNVIFGSD GGNTKAVASR IAKHIQGRAI DIKAANVADF ESPSLLILGS PTYGAGDLQT 
DWEAHLDKLT QAKLAGKKVA LFGTGDQVSY PDCFVDAMGV LYDLVVEQGA TVVGFTETAG
YDFTGSKAER DGQFVGLALD QDSQSSKTEK RITEWVSRLI