Gene RPC_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0074 
Symbol 
ID3971331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp83053 
End bp84252 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content64% 
IMG OID637923190 
Productputative branched chain amino acid periplasmic binding protein of ABC transporter 
Protein accessionYP_529972 
Protein GI90421602 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCG GAAATTGGTC GATTGTCGCG GCATCTGTGG TGATGCTGGC AACGTCGGCC 
CAAGGCGCGG CGGCGCAAGC CGTCAAGATC GGCATTCTCA ACGATCAGTC CGGCGTCTAC
GCCGATTACG GCGGCAAATG GTCGCTGGAA GCCGCCAGGA TGGCGGTCGA AGACTTCGGC
GGCGAGGTGC TCGGGCAGAA GATCGAGATC GTCACCGCCG ATCACCAGAA CAAGCCGGAC
ACCGCCATTT CCATCGCGCG AAAATGGTAC GACGTCGACG GCGTCGACAT GATCACCGAA
CTCACCACCT CCTCGGTGGC GCTGGCGGTG CAGGACCTGT CGAGAGAAAA GAAGAAGATC
GATATCGTGG TCGGCGCGGC CACCTCGCGG ATCACCGGCG ATGCCTGCCA GCCTTACGGT
TTCCACTGGG CGTTCGATAC CCACGCGCTC GCGGTCGGCA CCGGCGGCGC GCTGGTGGAA
GCGGGCGGCA ACACCTGGTT CTTCCTCACC GCGGACTACG CCTTCGGCTA CGCGCTGGAA
AAAGACACCA GCGAGATCGT GCTCGCCAAG GGCGGCAAGG TGCTGGGCGC GGTGCGCCAT
CCGTTGAACT CGTCGGACTT CTCCTCGTTC CTGCTGCAGG CGCAGAGCTC GAAGGCGAAG
ATCGTCGGGC TCGCCAATGC CGGGCTCGAC ACCGCCAATT CGATCAAGCA GGCGTCGGAA
TTCGGCATCG TCGCCGGCGG CCAGAAACTC GCCGGGCTGT TGATGACGCT CGCCGAAGTG
CACGGCCTCG GGCTGCAGGC GGCGCAGGGC CTGGTGTTGA CCGAAGCGTT TTATTGGGAC
CGCGACGACA CCTCGCGGGC GTTCGCCGAA AAGTTCTTCA AGCGCACCGG ACGGATGCCG
AACATGATCC AGGCCGGCAC CTATTCGGCG ACGCTGTCGT ATCTGAAGGC GGTGAAGGCC
GCAGGCTCCA AGGACACCGA GGCGGTGGCG AAGAAGCTGA AGGAATTGCC GGTCGACGAC
GCCTTCGCCA AGGGCAAGGT GCTGGCCAAC GGCCGCTTCG TCCACGACCT CTATCTGTTC
GAGGTCAAGA AGCCGTCGGA GTCCAAGCGG GCCTGGGACT ACTACAAGCT GCTCGCCACC
GTGCCCGGCG ACAAGGCGTT CCCCACCGCG GCCGAGAGCG GCTGCCCGCT GACCAAATAG
 
Protein sequence
MKFGNWSIVA ASVVMLATSA QGAAAQAVKI GILNDQSGVY ADYGGKWSLE AARMAVEDFG 
GEVLGQKIEI VTADHQNKPD TAISIARKWY DVDGVDMITE LTTSSVALAV QDLSREKKKI
DIVVGAATSR ITGDACQPYG FHWAFDTHAL AVGTGGALVE AGGNTWFFLT ADYAFGYALE
KDTSEIVLAK GGKVLGAVRH PLNSSDFSSF LLQAQSSKAK IVGLANAGLD TANSIKQASE
FGIVAGGQKL AGLLMTLAEV HGLGLQAAQG LVLTEAFYWD RDDTSRAFAE KFFKRTGRMP
NMIQAGTYSA TLSYLKAVKA AGSKDTEAVA KKLKELPVDD AFAKGKVLAN GRFVHDLYLF
EVKKPSESKR AWDYYKLLAT VPGDKAFPTA AESGCPLTK