Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0074 |
Symbol | |
ID | 3971331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 83053 |
End bp | 84252 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637923190 |
Product | putative branched chain amino acid periplasmic binding protein of ABC transporter |
Protein accession | YP_529972 |
Protein GI | 90421602 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCG GAAATTGGTC GATTGTCGCG GCATCTGTGG TGATGCTGGC AACGTCGGCC CAAGGCGCGG CGGCGCAAGC CGTCAAGATC GGCATTCTCA ACGATCAGTC CGGCGTCTAC GCCGATTACG GCGGCAAATG GTCGCTGGAA GCCGCCAGGA TGGCGGTCGA AGACTTCGGC GGCGAGGTGC TCGGGCAGAA GATCGAGATC GTCACCGCCG ATCACCAGAA CAAGCCGGAC ACCGCCATTT CCATCGCGCG AAAATGGTAC GACGTCGACG GCGTCGACAT GATCACCGAA CTCACCACCT CCTCGGTGGC GCTGGCGGTG CAGGACCTGT CGAGAGAAAA GAAGAAGATC GATATCGTGG TCGGCGCGGC CACCTCGCGG ATCACCGGCG ATGCCTGCCA GCCTTACGGT TTCCACTGGG CGTTCGATAC CCACGCGCTC GCGGTCGGCA CCGGCGGCGC GCTGGTGGAA GCGGGCGGCA ACACCTGGTT CTTCCTCACC GCGGACTACG CCTTCGGCTA CGCGCTGGAA AAAGACACCA GCGAGATCGT GCTCGCCAAG GGCGGCAAGG TGCTGGGCGC GGTGCGCCAT CCGTTGAACT CGTCGGACTT CTCCTCGTTC CTGCTGCAGG CGCAGAGCTC GAAGGCGAAG ATCGTCGGGC TCGCCAATGC CGGGCTCGAC ACCGCCAATT CGATCAAGCA GGCGTCGGAA TTCGGCATCG TCGCCGGCGG CCAGAAACTC GCCGGGCTGT TGATGACGCT CGCCGAAGTG CACGGCCTCG GGCTGCAGGC GGCGCAGGGC CTGGTGTTGA CCGAAGCGTT TTATTGGGAC CGCGACGACA CCTCGCGGGC GTTCGCCGAA AAGTTCTTCA AGCGCACCGG ACGGATGCCG AACATGATCC AGGCCGGCAC CTATTCGGCG ACGCTGTCGT ATCTGAAGGC GGTGAAGGCC GCAGGCTCCA AGGACACCGA GGCGGTGGCG AAGAAGCTGA AGGAATTGCC GGTCGACGAC GCCTTCGCCA AGGGCAAGGT GCTGGCCAAC GGCCGCTTCG TCCACGACCT CTATCTGTTC GAGGTCAAGA AGCCGTCGGA GTCCAAGCGG GCCTGGGACT ACTACAAGCT GCTCGCCACC GTGCCCGGCG ACAAGGCGTT CCCCACCGCG GCCGAGAGCG GCTGCCCGCT GACCAAATAG
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Protein sequence | MKFGNWSIVA ASVVMLATSA QGAAAQAVKI GILNDQSGVY ADYGGKWSLE AARMAVEDFG GEVLGQKIEI VTADHQNKPD TAISIARKWY DVDGVDMITE LTTSSVALAV QDLSREKKKI DIVVGAATSR ITGDACQPYG FHWAFDTHAL AVGTGGALVE AGGNTWFFLT ADYAFGYALE KDTSEIVLAK GGKVLGAVRH PLNSSDFSSF LLQAQSSKAK IVGLANAGLD TANSIKQASE FGIVAGGQKL AGLLMTLAEV HGLGLQAAQG LVLTEAFYWD RDDTSRAFAE KFFKRTGRMP NMIQAGTYSA TLSYLKAVKA AGSKDTEAVA KKLKELPVDD AFAKGKVLAN GRFVHDLYLF EVKKPSESKR AWDYYKLLAT VPGDKAFPTA AESGCPLTK
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