Gene RPC_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0054 
Symbol 
ID3971442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp62585 
End bp63097 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content64% 
IMG OID637923169 
Producthypothetical protein 
Protein accessionYP_529952 
Protein GI90421582 
COG category[S] Function unknown 
COG ID[COG4103] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCC GACTGCGCCA ATTCATCGCC GACGTCGTGG CGCCGGAGAC CGAGGACGAC 
CTCGCTTTCG ACGATACGGG TTATCGGCTG GCAGCGACCG CGTTGTTGAT TCACGTGATC
TCGCTCGATG GCGAACCGTC CGACGTGGAA CGCCGCAAGC TTCACGAGTT GCTGGAAACC
CGGTTCGGGC TCGATCCCGG CACGACGGCG CGACTGATCA AGTCGGCCAC CCTGGCGGAG
GGCGACGCGG TCGATTTGTA CCGTTTCACC AGCGTCATCA TGCGCACGGT CAACGAAGAG
GGGCGGCTGC GCATCATCGA GATGATGTGG GAGTTGGTCT ATGCCGACGC CAACGTCACC
GAGTTCGAGG AGAACGTCGT CTGGCGCGCC GCCGATCTGC TGGCGGTCTC GGCCCGTGAC
CGCATCAACC TGAAGCGCCA GGTGGCAAAA AACCAGGTGG CCGAAGGCCC GGTCGCTTAT
GCCTCCGGGG CCGGCCAAGT CGCCGAGACT TAG
 
Protein sequence
MLSRLRQFIA DVVAPETEDD LAFDDTGYRL AATALLIHVI SLDGEPSDVE RRKLHELLET 
RFGLDPGTTA RLIKSATLAE GDAVDLYRFT SVIMRTVNEE GRLRIIEMMW ELVYADANVT
EFEENVVWRA ADLLAVSARD RINLKRQVAK NQVAEGPVAY ASGAGQVAET