Gene RPC_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0043 
Symbol 
ID3971430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp50514 
End bp51212 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content69% 
IMG OID637923157 
Producthypothetical protein 
Protein accessionYP_529941 
Protein GI90421571 
COG category[R] General function prediction only 
COG ID[COG3897] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCG CCGCGGGATC CGCGCAAGAC CCGGCGATGA GCTCCTCCGC GATCGCCGAT 
CCGACCGCCT TCATCGCCGC CAATACGCGG CTGCGGCCGG TGCCACTGGT GCCGGAGGTG
ATGCTGCATG TCGCCGACGA GGCGCTGCCA CTGTGGAGCC GGACCGAGGA GGAACTGGGC
GAGGTCGGAT TGCCGCCGCC ATTCTGGGCG TTCGCCTGGG CCGGCGGCCA GGCGCTGGCG
CGCTATCTGC TCGATCATCC CGACAGCGTC GCCGGGCGCG AGGTGATCGA TTTCGCCTCC
GGCTCCGGGC TGGTGGCGAT TGCGGCGATG AAGGCCGGGG CGCAGAGTGT CACCGCATTC
GACATTGACG GCTTCGCGCG CGAGGCGATC GCGATCAATG CACGGGCCAA TGGCGTGACC
ATCGCGATCA GCGGCGACGA TCTGCTCGCC GCGCCGCATG TCGCGCCGGC GCAGACCGTG
CTGGCCGGCG ACATCTTCTA TCAGCGCGAC ATCGCCGCGC TGGCCTTCGC ATTTCTGCAG
CGCCGCGCGG CGCAAGGCGC CACCGTACTG ATCGGCGATC CCGGGCGGAC GTACTTGCCG
AAGCACCAGC TGACCCAGCT CGCCAGCTAC AGCGTGCCGG TGACGCGCGA ACTCGAGGAC
GCCGAGATCA AGGCGACCGG GGTGTGGACG CTGAAGTAG
 
Protein sequence
MDIAAGSAQD PAMSSSAIAD PTAFIAANTR LRPVPLVPEV MLHVADEALP LWSRTEEELG 
EVGLPPPFWA FAWAGGQALA RYLLDHPDSV AGREVIDFAS GSGLVAIAAM KAGAQSVTAF
DIDGFAREAI AINARANGVT IAISGDDLLA APHVAPAQTV LAGDIFYQRD IAALAFAFLQ
RRAAQGATVL IGDPGRTYLP KHQLTQLASY SVPVTRELED AEIKATGVWT LK