Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0041 |
Symbol | |
ID | 3971428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 46115 |
End bp | 47596 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637923155 |
Product | hypothetical protein |
Protein accession | YP_529939 |
Protein GI | 90421569 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGGC TGCTTCGGGT GATCCGCAAT CTGGTGGCGG CGCTCGTCGC CGCCGCCGTC GTGCTCGCGG GCGTGCTGGC ATTCAACGCC TTCCGACACG GCTCGCGGCA ATTGCAGGTC GCAGCGGTGC CGCCGGTTCA GGTCGACGAG GCCGGCGCCG CCAAGCGGCT GTCAGAGGCG ATCCGGTTTC GAACCATCTC CAATTTCCTC AATCCCGAGC AAGACGCCGC GGCGCTCGCC GCGTTGCAAG CCCATATCGT GGCGAGTTTC CCGGCGTTTC ATGCCGCGGC CCAGCGCGAG GTCGTGAACG GCAAGAGCCT GCTCTACACC TGGGAGGGCA GCGACCCGAC GCTGAAGCCG TTCGCGCTGC TGGCGCATCA GGACGTGGTG CCGATCGCGC CGAAGACCGA ACAGGACTGG CAGCAGCCGC CGTTCGATGG CGTCATCGCC GACGGTTACG TCTGGGGCCG CGGTTCCTGG GACGACAAAG GCAACCTCTA CGCCATGCTG GAAGCCGCCG AGGCGATGGC CAGGCAGGGC TTCCGTCCGA AGCGGACGGT GTATTTCGCC TTCGGCCATG ACGAAGAGGT CTCCGGCCTG CGCGGCGCCG GGGCCATCGC CAAGCTGCTC GCCTCGCGCG GCGTGAAGCT CGATTTCGTG CTCGACGAGG GCCTGCTGAT CACCGAGGGC ATCATGACCG GGCTGCCGCG GCCGGCGGCG CTGATCGGCG TCGCCGAGAA GGGCTACGCC ACGCTGGTGC TGACGGCGCG GGCGACACCC GGACATTCCT CGATGCCGCC GCGACAGACC GCGATCGGCA TGATGAGCGC GGCGCTCAGC CATCTCGAGG ACAAAAGGCT GCCGATGCAG ATCCGCGGCA CGGTGGCGGA AATGTTCGAT ACCCTGGCGC CGGAAATGCG CGGCATCTAT CGCGTCGTGC TGTCGAACCT GTGGCTGTTC AAGCCGCTAT TGCTGCGCGA ATTCGAAAAG ACCGGCCCGA CCGAGGCGAT GGTGCGCACC ACCACGGCAC TGACCATCTT CAATGCCGGC GACAAGGACA ACGTGCTGCC CGGCGTCGCC GAGGCCAGCG TGAATTTCCG GTTGGTGCCG GGCGACACCC AGGCCAGCAT CACCGACCAC GTCCGCGAGA CCATCGCCAA CGACAACATC GCGATTGGTG GATCCGAGGG CAATTTCGAC CCGCCGCCGG TGACCGGCAG CAAGAGCGCG GCCTATCGGC AGCTCAACCA GACCATCCGC GAGATCTTTC CCGACGTCGT GGTCGCGCCC GGGCTGATGG TGGCGGCCAC CGACTCGCGG CACTATGCCG AGGTCGCCGA CAACATCCTG CGGTTTTCGC CGGTGCGGGC AACGTCGGAG GATCTGAAGC GCTTCCACGG CACCAATGAG CGGCTCAGCA TCGCCAACTA CGCCGACATG ATCCGATTCT ATCGGCGGCT GATCGAGAAC ACCGCGGGAT AG
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Protein sequence | MRRLLRVIRN LVAALVAAAV VLAGVLAFNA FRHGSRQLQV AAVPPVQVDE AGAAKRLSEA IRFRTISNFL NPEQDAAALA ALQAHIVASF PAFHAAAQRE VVNGKSLLYT WEGSDPTLKP FALLAHQDVV PIAPKTEQDW QQPPFDGVIA DGYVWGRGSW DDKGNLYAML EAAEAMARQG FRPKRTVYFA FGHDEEVSGL RGAGAIAKLL ASRGVKLDFV LDEGLLITEG IMTGLPRPAA LIGVAEKGYA TLVLTARATP GHSSMPPRQT AIGMMSAALS HLEDKRLPMQ IRGTVAEMFD TLAPEMRGIY RVVLSNLWLF KPLLLREFEK TGPTEAMVRT TTALTIFNAG DKDNVLPGVA EASVNFRLVP GDTQASITDH VRETIANDNI AIGGSEGNFD PPPVTGSKSA AYRQLNQTIR EIFPDVVVAP GLMVAATDSR HYAEVADNIL RFSPVRATSE DLKRFHGTNE RLSIANYADM IRFYRRLIEN TAG
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