| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0031 |
|---|
| Symbol | |
|---|
| ID | 3971456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 36651 |
|---|
| End bp | 37988 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637923145 |
|---|
| Product | argininosuccinate synthase |
|---|
| Protein accession | YP_529929 |
|---|
| Protein GI | 90421559 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.394017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACGA TCTTGAAAAG CCTGCCCAAG GGGGAAAACG TCGGCATTGC TTTCTCGGGC
GGGCTCGACA CCAGCGCGGC GCTGTTGTGG ATGAAGCAAA AGGGCGCCCG GGTGTTCGCC
TATACGGCGA ATCTCGGCCA GCCCGACGAG GCCGATTACG ACGAGATCCC GCGCAAGGCG
ATGGAGTTCG GCGCCGAGAA GGCCCGCCTG GTCGATTGCC GCAGCCAACT GGTGCACGAA
GGCATCGCCG CCATTCAATC GGGCGCGTTC CATGTTTCGA CCGGCGGCGT TGCCTACTTC
AACACCACGC CGCTCGGCCG CGCCGTCACC GGCACCATGC TGGTGTCGGC GATGAAGGAA
GACGGCGTCA ACATCTGGGG CGACGGCTCG ACCTACAAGG GCAACGATAT CGAGCGGTTC
TACCGCTACG GGCTTTTGAC CAATCCGGAT CTGCGGATCT ACAAGCCCTG GCTCGACCAG
CAATTCATCG ACGAATTGGG CGGCCGCGCC GAAATGTCGG CGTTCATGAC CGCCCACGGC
TTCGCCTACA AGATGAGTTC GGAAAAGGCC TACTCGACCG ACAGCAATCT CTTGGGCGCC
ACCCACGAGG CCAAGGACCT CGAACACCTC GATAGCGGCA TCCGAATCGT CAACCCGATC
ATGGGCGTGC CGTTCTGGCG CGACGACTGC GCCGTTGCGG CCGAGACGGT TTCGGTGCGG
TTCGCGGAAG GCCAGCCGGT CGCGCTGAAC GGGAAGACCT TCACTGATCC GGTCGCGCTG
TTCCTCGAGG CCAACGCGAT CGGCGGCCGC CACGGTCTCG GCATGAGCGA CCAGATCGAG
AACCGCATCA TCGAGGCGAA GAGCCGCGGC ATCTACGAAG CGCCGGCGAT GGCGCTGCTG
CACATCGCCT ATGAGCGTCT GGTCACCGGC ATCCACAACG AGGACACCAT CGAGCAGTAC
CGGATCAGCG GCATGCGGCT TGGCCGCTTG CTCTACCAGG GCCGCTGGTT CGATTCGCAG
GCCTTGATGC TGCGCGAGAC CGCGCAGCGC TGGGTGGCGC GCGCCATCAC CGGCGAGGTG
ACGCTGGAGC TGCGCCGCGG TAACGACTAC TCGATCCTGA ACACCCAGAG CCCGAACCTG
ACCTATGCGC CGGAGCGGCT GAGCATGGAG AAGGTCGAGG ACGCGCCTTT CACGCCGGGC
GACCGCATCG GCCAATTGAC CATGCGCAAC CTCGACATCA CCGACACCCG CGCCAAGCTC
GATCTCTACG CCAAGTCGGG CCTGCTCTCG GCCGGCGAGG GCTCGCACAT TCCGAAACTC
GAGAGCGACA AGGGCTGA
|
|---|
| Protein sequence | MSTILKSLPK GENVGIAFSG GLDTSAALLW MKQKGARVFA YTANLGQPDE ADYDEIPRKA
MEFGAEKARL VDCRSQLVHE GIAAIQSGAF HVSTGGVAYF NTTPLGRAVT GTMLVSAMKE
DGVNIWGDGS TYKGNDIERF YRYGLLTNPD LRIYKPWLDQ QFIDELGGRA EMSAFMTAHG
FAYKMSSEKA YSTDSNLLGA THEAKDLEHL DSGIRIVNPI MGVPFWRDDC AVAAETVSVR
FAEGQPVALN GKTFTDPVAL FLEANAIGGR HGLGMSDQIE NRIIEAKSRG IYEAPAMALL
HIAYERLVTG IHNEDTIEQY RISGMRLGRL LYQGRWFDSQ ALMLRETAQR WVARAITGEV
TLELRRGNDY SILNTQSPNL TYAPERLSME KVEDAPFTPG DRIGQLTMRN LDITDTRAKL
DLYAKSGLLS AGEGSHIPKL ESDKG
|
|---|
| |