Gene RPC_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0024 
Symbol 
ID3971449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp29426 
End bp31204 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content69% 
IMG OID637923138 
Productheparinase II/III-like 
Protein accessionYP_529922 
Protein GI90421552 
COG category[S] Function unknown 
COG ID[COG5360] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGTAG CCTATCGCAG ACGATTGTCG ACGCTGATCC TGGGCCGTTT TGCGCGCAAC 
CTGATGGCGC GCGCCTCGGC GGGCTCGGTG GCGTTGTCGC GGCTGTGGCC CGGTCGCACC
GACCGGCTGA TCATCGCGCC GCACGATCTG CGCACCGCCG ACGCCACGCG CGCCGCCGAA
ATCTACGCCG GACGTTTCGT GTTCGCCGGC AAGATCGTCA CCTGCCACGG TCGTTCGATC
TTCGATTACG CGCCGCCCTC GGACGACTGG GAGGTGGCGT TGCTCGGCTT CGGCTGGCTG
CGCCACCTGC GTGCCGCCGA CACCGCGATC ACCCGCGCCA ATGCCCGCTC GCTGGTCGAC
GACTGGATCT CCAACATGTC GCACAACCGG CCGGTCGGTC GGCGGCCCGA CGTGCTGGCG
CGCCGGGTGA TCTCGCTGTT GTCGCAGGCG CCGTTGGTGC TCAGCGACAC CGACGGCCGG
TTCTATCGCC GCTATCTGCG CGGGTTGACC CGCGAAATCC GCAGCCTGCG CTACATCACC
CCGGACATCG CCGACGGCGT GCCGCGGCTG CAGGTCTTGA TCGCGCTGTG CTACGCCTCG
CTCTGTCTCG CCAACCAGGC GCGCCATATC CGCGCCGCCT CGCGCAAATT GTCCGACGAG
CTGCAGCGGC AGATTCTGGC CGACGGCGGC CACATCTCGC GCAATCCCGG CGCGCTGATC
GAACTGATGA TCGACCTGCT GCCGCTGCGC CAGACCTTCG CCGCGCGCAA CATCGCGCCG
CCGCCGGCGC TGTTGAACGC GATCGACCGG ATGATGCCGA TGCTGCGGTT CTTCCGCCAC
GGCGACGGCA GTTTCGCGCT GTTCAACGGC ATGAGCAGCG CGCCGTCGGA TCTCTTGGCG
ACGCTGCTGG CCTATGACGA TACCCACGGC AGCCCGATGT CGAGCATGCC GCACACCGGT
TTCCAGCGGC TCGACGCCGG CACCATGACG GTGATCGTCG ACACCGGCCC GCCGCCGCCG
CCGGCCGTCA GCGACGAGGC CCATGCTGGC TGCTTGTCGT TCGAAATGTC GGTGGCCGGC
TGCCGCGTCG TGGTCAATTG CGGCATCCCC GCCACCGGCC GGGAGAACTG GCGCAGCTTC
GCCCGCGGCA CCGCGGCGCA TTCCACCGTG ACCTACCGCG AAACCTCGTC GTGCCAGTTC
GTCGAGCGCT CCTCGATGAA ACGTTTCCTG AACGGCGCGC CGATCGTCTC CGGGCCGGTC
CATGTCGAGC ATTATCGCGA GGTCGGTGCC GAGGGCGTGA TGCTGAACAT GTCGCATGAC
GGCTATCAGT CGCGGTTCGG GGTGACCCAT CGCCGCGTGC TGATGGCTTC CGTCGACGGC
TCGCGGCTGG ACGGCGAGGA CACCGTCGCG GCGGCGCCGG GCGCGCGGAT CAAGGGCAAT
GACGCCAGCT ATGCGGTGCG GTTTCATCTG CACCCTGCGG TCAAGGCCAG CCGGCTCACC
GACGCCCGCG GCGTCATGCT GGTGCTGCCG AACCGCGAGG TCTGGACCTT CGAGGCGCTC
GACGACAAGG TCGAGCTCGA GGACAGCGTG TTTCTTGCCG GCAATGACGG GCCGCGCCGC
ACCGTGCAGA TCGTGATCCG GCAGGACGCC CGCCACACCT CCTCGATCCG CTGGAACTTC
GTCCGCTCGC CGAGCTCGCC GGCGGCCACC GCTGCGCGGC GCAATAACCG CGGCCAGGCC
GAGTTGCCGC TGCCGCCGCC GACCCCATCG CGATCTTGA
 
Protein sequence
MSVAYRRRLS TLILGRFARN LMARASAGSV ALSRLWPGRT DRLIIAPHDL RTADATRAAE 
IYAGRFVFAG KIVTCHGRSI FDYAPPSDDW EVALLGFGWL RHLRAADTAI TRANARSLVD
DWISNMSHNR PVGRRPDVLA RRVISLLSQA PLVLSDTDGR FYRRYLRGLT REIRSLRYIT
PDIADGVPRL QVLIALCYAS LCLANQARHI RAASRKLSDE LQRQILADGG HISRNPGALI
ELMIDLLPLR QTFAARNIAP PPALLNAIDR MMPMLRFFRH GDGSFALFNG MSSAPSDLLA
TLLAYDDTHG SPMSSMPHTG FQRLDAGTMT VIVDTGPPPP PAVSDEAHAG CLSFEMSVAG
CRVVVNCGIP ATGRENWRSF ARGTAAHSTV TYRETSSCQF VERSSMKRFL NGAPIVSGPV
HVEHYREVGA EGVMLNMSHD GYQSRFGVTH RRVLMASVDG SRLDGEDTVA AAPGARIKGN
DASYAVRFHL HPAVKASRLT DARGVMLVLP NREVWTFEAL DDKVELEDSV FLAGNDGPRR
TVQIVIRQDA RHTSSIRWNF VRSPSSPAAT AARRNNRGQA ELPLPPPTPS RS