| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0022 |
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| Symbol | |
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| ID | 3971447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 26145 |
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| End bp | 27536 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637923136 |
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| Product | major facilitator transporter |
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| Protein accession | YP_529920 |
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| Protein GI | 90421550 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2270] Permeases of the major facilitator superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA GCCTCGCCGC CGGCGCGACC CGCGCGGCCG CCGCACCACG CTATCCGCGG
CGCTCCGCGG TGGTCGGCTG GATCCTGTTC GACTGGGCGG CGCAGCCTTA TTTCACGCTG
ATCACCACCT TCATCTTCGC GCCGTATTTC ACCACTTTTG TCGCCGCCGA TCCGGCGCAA
GGCCAATCGC TGTGGGGCTT TGCCACCGGC GCCGCCGGGC TGATCATCGC GCTGGCCTCG
CCGGTGCTCG GTGCGATTGC GGATGCCAGC GGAAGGCGCA AGCCGTGGAT CTTCGGCTTC
GGCGCATTGC TGGTGATCGG CTCCTGCGCG ATGTGGTTCG GCCGTCCCGG TGACCCAACC
GTGATCCTGC CGCTGTTGAT TGCCTATGGC GTGGCGACCA TCGGCGTCGA ATTCGCCACC
GTGTTCAACA ATGCGATGAT GCCGCATCTG GTGCCGCCCG ATCAGATCGG ACGATTGTCC
GGCACCGGCT GGGCCACCGG CTATGTCGGC GGCATCCTGT CGCTGATCCT GGTGCTGGGA
TTTCTCGCCG GCAGTCCCGA CACCGGCCGC ACGCTGTTTG GCCTGTTGCC ATGGTTCGGG
CTCGATCCTC TGACGCATCA GGGCGACCGC ATCACCGGGC CGCTGACCGG CATCTGGTTC
GTTGTCTTCG TCCTGCCAAT GTTTCTGCTG ACGCCGGATT TTCCGGCCAA GCGCAAGCTC
GGCGCCGCGG TGCGCGAGGG CTTGCGCGAG CTCGGGCAGA CGCTGCGCGA ATTGCCGAAG
CACCGCTCGA TGGCGACGTT CCTGCTCGCC AACATGATCT ACACCGACGG GCTGGTCTCG
TTGTTTGCGT TCGGCGGCAT TTATGCCGCC GGCACGTTCG GATGGCACAC CTTGCAGATC
GGCAGCTTCG GCATCCTGCT GGCGATCGCC GCCACCTTCG GCGCTTATCT CGGCGGCAAG
CTCGACGACG CGCTGGGGCC GAAGCGGGTG ATCGCCGGCA GCATGATGTT GCTGCTGATC
GCGGTGCTAG GCATCCTGCT GGTCGAGCGG GATTCGATTT TGTTCATTGC GGTGACGCCG
CCGCAGCCCG GCGGCGCGCT GTTCGCAGCT CCCGCCGAGC GCGCTTATCT CCTGCTCGGC
TGCCTGATAG GCATCGCCGG CGGGCCGCTG CAGGCGGCGT CGCGCTCGCT GCTGATCCAC
ATGGCGCCGA AGCAGCGCAT CGCGCAGTTC TTCGGGCTGT TCGCGCTGAC CGGCAAGGTC
ACCTCGTTCA TCGGCCCGAT GCTGATCGGC GCGGTCACCG CGATCACCAT GAGCCAGAAG
GCCGGGATGG CGGTGTTGGT GCTGTTCTTC GTCGCCGGCC TGGTGTTGTT GGCGAAGGTG
CGGAACAAGT AA
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| Protein sequence | MADSLAAGAT RAAAAPRYPR RSAVVGWILF DWAAQPYFTL ITTFIFAPYF TTFVAADPAQ
GQSLWGFATG AAGLIIALAS PVLGAIADAS GRRKPWIFGF GALLVIGSCA MWFGRPGDPT
VILPLLIAYG VATIGVEFAT VFNNAMMPHL VPPDQIGRLS GTGWATGYVG GILSLILVLG
FLAGSPDTGR TLFGLLPWFG LDPLTHQGDR ITGPLTGIWF VVFVLPMFLL TPDFPAKRKL
GAAVREGLRE LGQTLRELPK HRSMATFLLA NMIYTDGLVS LFAFGGIYAA GTFGWHTLQI
GSFGILLAIA ATFGAYLGGK LDDALGPKRV IAGSMMLLLI AVLGILLVER DSILFIAVTP
PQPGGALFAA PAERAYLLLG CLIGIAGGPL QAASRSLLIH MAPKQRIAQF FGLFALTGKV
TSFIGPMLIG AVTAITMSQK AGMAVLVLFF VAGLVLLAKV RNK
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