| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0015 |
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| Symbol | |
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| ID | 3969440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 17680 |
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| End bp | 19332 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637923129 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_529913 |
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| Protein GI | 90421543 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGG CCCTCACTTC GAAACGGATG ACCATCGGCG AAGGGGGCTT GCTCGCCCTG
TTCACCGTCA TGGTGGCGCT TTGTGTCCTC GCCGTGATCA AAGCTCAGGA CTCCGCCTTT
GCCTTCCACG CCGCCATCGG TGCTGCGGTC AGCGCCTGGG CGGTGTTCGC GATCTTCACC
CGGTTCTCCG GCCGCCCGGC AGCCCGCCCG CCGCAGGAGA TCAACGGCGT GCCGAACTAC
AATTTCGGCC CGGTCAAGTT CTGCTCGTTC ATGGCGATGT TCTGGGGCAT CGCCGGCTTC
AGCGTCGGGC TGATGATCGC CCTGCAGCTG GCCTTCCCGC TGCTCAATTT CGACATTCAA
TGGATCTCAT TCGGCCGGCT GCGGCCGCTG CACACCTCCG CGGTGGTGTT CGCGTTCGGC
GGCAACGTGC TGCTGGCGAC CTCGCTCTAC GTGGTCCAGA AGACCTCGCG GGTGCGGCTC
GCCGGCGATC TGGCGCCGTG GTTCGTGGTG ATCGGCTACA ACGTCTTCAT CCTGATCGCC
GGCACCGGCT ATCTGCTCGG CGTCACCCAG TCCAAGGAAT ATGCCGAGCC GGAATGGTAC
TCCGACGCGT TGCTCACCGT CGTCTGGGTC GCCTATCTCT TGGTGTTCCT GATGACGCTG
GTGAAGCGCA AGGAACCGCA CATCTTCGTG GCGAACTGGT TCTACCTCGC CTTCATCATC
ACCATCGCGG TGCTGCATCT GGGCAACAAT CCCGCGGTGC CGGTGTCGTG GTTCGGCTCG
AAATCCTACA TCGCCTGGGG CGGCGTGCAG GACGCCATGT TCCAGTGGTG GTACGGCCAT
AACGCGGTCG GCTTCTTCCT CACCGCCGGC TTCCTCGCCA TCATGTACTA CTTCATCCCG
AAGCGCGCCG AGCGGCCGAT CTATTCCTAT CGGCTGTCGA TCATCCACTT CTGGGCGCTG
ATCTTCCTCT ACATCTGGGC CGGCCCGCAT CACCTGCACT ACACCGCGCT GCCGGATTGG
ACGCAGACGC TCGGCATGAC CTTCTCGATC ATGCTGTGGA TGCCGTCTTG GGGCGGCATG
ATCAACGGCC TGATGACGCT GTCGGGCGCC TGGGACAAGC TGCGCACCGA TCCGGTGCTG
CGCATGCTGG TGGTCTCGGT GGCGTTCTAC GGCATGTCGA CCTTCGAAGG TCCGATGATG
GCGATCAAGG TCGTCAACTC GCTCAGCCAC TACACCGACT GGACCGTCGG CCACGTCCAC
TCCGGCGCGC TCGGCTGGGT CGGCTTCGTC TCGTTCGGCG CCTTGTACTG CCTGGTGCCG
TGGGTCTGGA ACCGGAAGCA GCTGTATTCG CTGAAGCTGG TGAACTGGCA CTTCTGGATC
GCGACGCTGG GTATCGTGCT CTACATCTCG GCGATGTGGG TGTCGGGAAT TCTGCAGGGC
CTGATGTGGC GCGCCTACAC CTCGCTCGGC TTCCTGGAAT ATTCCTTCAT CGAGAGCGTG
GAAGCGATGC ATCCGTTCTA CATGATCCGC GCGGCCGGCG GCGGCCTGTT CCTCTGCGGC
GCGCTGATCA TGGCCTATAA CCTCTGGATG ACGGTCCGTA CCGGCGAGTC ATCGGAAACG
CAGCCGAGCG TTGCGCTTCA GGCAGCCGAA TAA
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| Protein sequence | MNQALTSKRM TIGEGGLLAL FTVMVALCVL AVIKAQDSAF AFHAAIGAAV SAWAVFAIFT
RFSGRPAARP PQEINGVPNY NFGPVKFCSF MAMFWGIAGF SVGLMIALQL AFPLLNFDIQ
WISFGRLRPL HTSAVVFAFG GNVLLATSLY VVQKTSRVRL AGDLAPWFVV IGYNVFILIA
GTGYLLGVTQ SKEYAEPEWY SDALLTVVWV AYLLVFLMTL VKRKEPHIFV ANWFYLAFII
TIAVLHLGNN PAVPVSWFGS KSYIAWGGVQ DAMFQWWYGH NAVGFFLTAG FLAIMYYFIP
KRAERPIYSY RLSIIHFWAL IFLYIWAGPH HLHYTALPDW TQTLGMTFSI MLWMPSWGGM
INGLMTLSGA WDKLRTDPVL RMLVVSVAFY GMSTFEGPMM AIKVVNSLSH YTDWTVGHVH
SGALGWVGFV SFGALYCLVP WVWNRKQLYS LKLVNWHFWI ATLGIVLYIS AMWVSGILQG
LMWRAYTSLG FLEYSFIESV EAMHPFYMIR AAGGGLFLCG ALIMAYNLWM TVRTGESSET
QPSVALQAAE
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