| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0005 |
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| Symbol | gyrB |
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| ID | 3969430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 6602 |
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| End bp | 9043 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923119 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_529903 |
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| Protein GI | 90421533 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAC CCGCCCGGCA GCCGATTGCC GAACCCGAAG CCTCTGCTCC CGTCGAATAT
GGCGCGGAAT CGATCCGGGT GCTGAAGGGT CTCGACGCGG TGCGCAAGCG GCCCGGCATG
TATATCGGCG ACACCGATGA CGGCTCCGGC CTGCACCACA TGGTCTATGA GGTGGTCGAC
AACGCCATCG ACGAGGCGCT GGCCGGCCAC GCCACCGCGG TCGAGGTGGT GCTGAACGCC
GACGGCTCGG TGACGGTGCG CGACGACGGC CGCGGCATCC CGGTCGGCAT CCACAAGGGC
GAAGGCATTT CGGCGGCCGA GGTCATCATG ACCCAGCTGC ACGCCGGCGG AAAATTCGAT
CAGAATTCCT ACAAGGTCTC CGGCGGTCTG CACGGCGTCG GCGTCTCGGT GGTCAACGCG
CTGTCCAGCA AGCTGCAGCT GCGGGTCTGG CGCGACGGCA AGGAGCACTT CATCGAATTC
GCCCATGGCG ACGCGGTGGC GCCGCTGGTG GTGGTCGGCG ATTCCAACGG CAAGCGCGGC
ACCGAGGTGA CGTTCCTGGC CTCGCCGGAA ACCTTCACCC ATATCGAATA TGACTTCGCC
ACGCTGGAGC ATCGGCTGCG CGAGCTCGCG TTCCTGAATT CCGGCGTCAC CATCGTGCTG
TCCGACCTGC GCCACCCGGT CGAAAAGCGC GAGGAGATGA TGTATCGCGG CGGCGTCGAG
GAATTCGTCA AATATCTCGA TCGCAACAAG AAAGCGATGG TGCCCGCGCC GATCATGATC
GCGGCGGAAC TGAACGGCAT CGGCGTCGAG GCGGCGCTGT GGTGGAACGA CAGCTATCAT
GAGAACGTGC TGTGCTTCAC CAACAACATC CCGCAGCGCG ACGGCGGCAC CCATCTGGCC
GGCTTCCGCG GCGCGCTGAC CCGCCAGGTC AACGGCTATG CGGACGTCAT CGCCAAGAAG
GAAAAGATCG CGCTGACCGG CGACGATTGC CGCGAGGGCC TCACCGCAGT GCTGTCGGTG
AAAGTGCCGG ATCCGAAATT CTCCTCGCAG ACCAAGGACA AGCTGGTCTC CTCCGAGGTT
CGGCCGGTGG TCGAGAACGT CTTGAACGAG GCGCTCGCCG CGTGGTTCGA GGAACACCCC
GCCGAGGCCA AGATCATCGT CGGCAAGGTG ATCGAAGCCG GCGCCGCACG CGAAGCCGCG
CGAAAAGCCC GCGAACTCAC CAGGCGCAAG GGCGCGCTGG ATATCGCCTC GTTGCCGGGA
AAACTCGCCG ACTGCCAGGA ACGCGATCCG GCAAAGTCCG AACTGTTCAT CGTCGAGGGC
GACTCCGCAG GCGGCAGCGC CAAGCAGGGC CGCAATCGCG AATTCCAGGC GGTGCTGCCG
CTGCGCGGCA AGATCCTCAA CGTCGAGCGC GCCCGGTTCG ACAAGATGCT CGGCTCCGAG
CAGATCGGCA CGCTGATCAC AGCATTGGGC ACCGGCATCG GCCGCGACGA TTTCGACATC
TCCAAGCTAC GCTATCACAA GATCATTCTG ATGACCGACG CCGACGTTGA CGGCGCGCAT
ATCCGCACGC TGTTGCTGAC GTTCTTTTTC CGGCAGATGC CGTCCTTGAT CGAGGGCGGT
TTCCTCTACA TCGCGCAGCC GCCGCTCTAC AAGGTGACGC GCGGCAAGTC CGAGCAATAT
CTCAAAGACG AGCGCGCGTT GGAAGACTAC CTGATCGAGA CCGGGCTCGA CGACTGTGTG
TTCAAGCTGG CGTCGGGCGA AGACCGCAGC AGCCGCGACC TGTTGGCGCT GGTGGAGGAT
GCCCGGCAGA TCCGCGGCAC GCTGCACAAT CTGCACAGCC GCTACAATCG TAGCGTGGTC
GAACAAGCGG CGATCGCCGG CGTGCTCAAC CCGCGCGTCA CCGCCGATCT CGCCACCGCC
AACGAGGCCG CGGCCTATAT CGCGCGGCGG CTCGATGCGC TCGCCGACGA GGTCGAGCGC
GGCTGGGTCG GCCGCTTCGT CGAAGGCGAA GGTTTTTCCT TTGAACGCAC CGTGCGCGGT
GTGAAAGACG TGGCGATGAT CGACGCCGCG CTGTTGTCCT CCGCCGATGC CCGCAAGCTC
GACGAATACG CCGTCAATCT GCAGGAGGCC TATCCGCGGC CGGGGATCTT GCGCCGCAAG
GATACCGAGA CCCCGATCCA CGGCCCGGTC AGTCTGTTCG AGGCGGTGAC CGACGCCGGC
CGCAAGGGCG TGGCGCTGCA GCGCTACAAA GGCCTCGGCG AGATGAACCC GGAGCAGCTC
TGGCACACCA CGCTCGACAC CAATGCGCGC TCCTTGTTGC AGGTGAAGGT GCGCGAGGTC
GACGAGGCCG ACGACATCTT CACCAAGCTG ATGGGCGACG TGGTCGAGCC GCGCCGCGAG
TTCATCCAGG ACAACTCGCT CAGCGCCAAC GTCGACGTGT AG
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| Protein sequence | MTEPARQPIA EPEASAPVEY GAESIRVLKG LDAVRKRPGM YIGDTDDGSG LHHMVYEVVD
NAIDEALAGH ATAVEVVLNA DGSVTVRDDG RGIPVGIHKG EGISAAEVIM TQLHAGGKFD
QNSYKVSGGL HGVGVSVVNA LSSKLQLRVW RDGKEHFIEF AHGDAVAPLV VVGDSNGKRG
TEVTFLASPE TFTHIEYDFA TLEHRLRELA FLNSGVTIVL SDLRHPVEKR EEMMYRGGVE
EFVKYLDRNK KAMVPAPIMI AAELNGIGVE AALWWNDSYH ENVLCFTNNI PQRDGGTHLA
GFRGALTRQV NGYADVIAKK EKIALTGDDC REGLTAVLSV KVPDPKFSSQ TKDKLVSSEV
RPVVENVLNE ALAAWFEEHP AEAKIIVGKV IEAGAAREAA RKARELTRRK GALDIASLPG
KLADCQERDP AKSELFIVEG DSAGGSAKQG RNREFQAVLP LRGKILNVER ARFDKMLGSE
QIGTLITALG TGIGRDDFDI SKLRYHKIIL MTDADVDGAH IRTLLLTFFF RQMPSLIEGG
FLYIAQPPLY KVTRGKSEQY LKDERALEDY LIETGLDDCV FKLASGEDRS SRDLLALVED
ARQIRGTLHN LHSRYNRSVV EQAAIAGVLN PRVTADLATA NEAAAYIARR LDALADEVER
GWVGRFVEGE GFSFERTVRG VKDVAMIDAA LLSSADARKL DEYAVNLQEA YPRPGILRRK
DTETPIHGPV SLFEAVTDAG RKGVALQRYK GLGEMNPEQL WHTTLDTNAR SLLQVKVREV
DEADDIFTKL MGDVVEPRRE FIQDNSLSAN VDV
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