Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0001 |
Symbol | dnaA |
ID | 3969426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 758 |
End bp | 2179 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923115 |
Product | chromosomal replication initiation protein |
Protein accession | YP_529899 |
Protein GI | 90421529 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.884369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACA TCGAACAGGA TCGCTGGTCA CGGGTTAAGG GCCGCTTGCG CTCAAGCGTC GGTGAAGACG TTTACTCGAG CTGGTTCGCC CGGATGGATC TGGAAAGCGT GCAGCCCGAA AGCGTGCACC TGTCGGTCCC GACGCGATTC CTGAAGAGCT GGATCCAGAC GCATTATTCC GATCGCGTGC TGAGCTGCTG GCAGGCCGAG ATGCCGCAGG TGCATCGCGT CGACCTCACC GTGCGCACCG CGATGCGCTG TGCCGCGCCC GCCAAGGACG CGCCGGCGCA CGCCGAGCCG CGCCGCGACG ATGGCCGCCC GGCACCCGAG CTGCGCGCCA CAGCGATCGC GCCGGTGTCC GCCACACATG AAGCGCTCGG CGGCTCGCCG CTCGATCCGC GGCTGACCTT CGGCAGCTTC GTGATCGGCC GCTCCAACAC GCTGGCGCAT GCCGCAGCAA GACAGGTCGC GGAAGGCCGC CGCGGCGATC CGGTGATGTT CAATCCGCTC TACATTCACT CCGGCGTTGG TCTCGGCAAA ACCCATCTGC TGCAGGCGGT GACCTGGGCC GGCAATTCCG GCACCGAACG CAAGGTGCTG TATCTCACCG CCGAGAAATT CATGTACGGC TTCGTCGCGG CGCTGAAATC GCAGACCGCG CTGGCCTTCA AGGAAGCGCT GCGCGGCATC GACGTGCTGG TGATCGACGA TCTGCAGTTC CTGCAAGGCA AGACCACGCA GGCGGAGTTC TGCCACACCC TGAACGCGCT GATCGATGCC GGCCGCCAGG TGGTGATCGC CGCCGATCGG CCGCCGTCGG ACCTGGAGAG CCTCGACGAG CGGGTGCGCT CGCGGCTCGC CGGCGGCCTC GTCGTCGAAA TGGCCTCGCT CGGCGAGGAT CTGCGGCTCG GTATCCTGAA ATCGCGGGTC ACCGCGGCCC GCGCGCATCA CGCGAGCTTC GACGTGCCGC TACCGGTGTT GGAATATCTC GCCCGCACCA TCACCCACAA CGGCCGCGAC CTCGAAGGCG CGATCAATCG CCTTTTGGCG CACTCCAAGC TGAACGCCCA GCCGGTGACG CTGGAAATGG CCGAGCGGGA AATCCGCGAC CTGGTCCGTC CGCAGGAGCC GAAGCGGATC AAGATCGAAG ACATTCAGCG CGTGGTGGCA CGGCAATACA ATGTCAGCCG CTCCGACTTG CTGTCATCCC GCCGCACCGC CAATGTGGTG CGGCCGCGCC AGGTGGCGAT GTATCTGGCC AAGACGCTGA CGCTACGCTC GCTGCCGGAG ATCGGCCGCA GGTTCGGCGG CCGCGACCAC ACCACGGTGT TGCACGCGGT TCGCAAGATC GAAGGGCTGG TCGCCAAGGA TACGGCGTTG TCCGACGAGG TGGAACTGCT GAAGCGCCAG CTCCAGGAAT AA
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Protein sequence | MTNIEQDRWS RVKGRLRSSV GEDVYSSWFA RMDLESVQPE SVHLSVPTRF LKSWIQTHYS DRVLSCWQAE MPQVHRVDLT VRTAMRCAAP AKDAPAHAEP RRDDGRPAPE LRATAIAPVS ATHEALGGSP LDPRLTFGSF VIGRSNTLAH AAARQVAEGR RGDPVMFNPL YIHSGVGLGK THLLQAVTWA GNSGTERKVL YLTAEKFMYG FVAALKSQTA LAFKEALRGI DVLVIDDLQF LQGKTTQAEF CHTLNALIDA GRQVVIAADR PPSDLESLDE RVRSRLAGGL VVEMASLGED LRLGILKSRV TAARAHHASF DVPLPVLEYL ARTITHNGRD LEGAINRLLA HSKLNAQPVT LEMAEREIRD LVRPQEPKRI KIEDIQRVVA RQYNVSRSDL LSSRRTANVV RPRQVAMYLA KTLTLRSLPE IGRRFGGRDH TTVLHAVRKI EGLVAKDTAL SDEVELLKRQ LQE
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