Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_R0014 |
Symbol | |
ID | 3968266 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1414219 |
End bp | 1417090 |
Gene Length | 2872 bp |
Protein Length | |
Translation table | |
GC content | 52% |
IMG OID | 640713285 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0368239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GGTCAAGTGA TTAAGCGCAC ATGGTGGATG CCTTGGCAGT TAGAGGCGAT GAAAGACGTA GGAGCCTGCG ATAAGGCTAG GGGAGCTGGC ACACAAGCTT TGATCCTAGC ATTTCTGAAT GGGGAAACCC ACTGAGCTTG CTCAGTATCG TGCACTGAAT ACATAGGTGT ACGAGGCGAA CCCGGGGAAC TGAAACATCT AAGTACCCGG AGGAAAAGAA ATCAACCGAG ATTCCCTAAG TAGCGGCGAG CGAAAGGGGA GCAGCCGATG ATTTAAGAGG TAGTGGAACA GTCTGGAAAG TCTGGCGATA CAGGGTGATA GCCCCGTACA CGAAATCTCT TAAGTCACAT ATTAAGTAGG ACGGGACACG TGTTATCTTG TCTGAAGATG GGGGGACCAT CCTCCAAGGC TAAATACTCC TAACTGACCG ATAGTGAACC AGTACCGTGA GGGAAAGGCG AAAAGAACCC CGGAGAGGGG AGTGAAATAG ATCCTGAAAC CGTGTGCGTA CAAGCAGTTG GAGCTCTTCG GAGTGACAGC GTACCTTTTG TATAATGGGT CAGCGACTTA TTGTATGTGG CCAGGTTAAC CGCTTAGGGG AGCCGTAGGG AAACCGAGTC TTAATAGGGC GTCCAGTCGC ATGCAATAGA CCCGAAACCC GGCGATCTAT CCATGGGCAG GTTGAAGGTT AGGTAACACT GACTGGAGGA CCGAACCCAC TAACGTTGAA AAGTTAGGGG ATGACCTGTG GATCGGAGTG AAAGGCTAAT CAAGCCGGGA GATAGCTGGT TCTCCCCGAA AACTATTTAG GTAGTGCGTC ATGTCTCACC CACGGGGGTA GAGCACTGTT TGGGCTAGGG GGTCATCCCG ACTTACCAAC CCCATGCAAA CTCCGAATAC CGTGGAGTGC AATCATGGCA GACAGACTGC GGGTGCTAAC GTCCGTAGTC AAGAGGGCAA CAACCCAGAC CGCCAGCTAA GGTCCCAAAT ATCAGTTAAG TGGGAAACGA TGTGGGAAGG CTTAGACAGC TAGGAGGTTG GCTTAGAAGC AGCCACCCTT TAAAGAAAGC GTAATAGCTC ACTAGTCGAG TCGGCCTGCG CGGAAGATTT AACGGGGCTC AAACTGATAA CCGAAGCTGC GGATACTTTC GAGTATGGTA GGGGAGCGTT CTGTAAGCCT GTGAAGGTGA ACTGAGAAGT TTGCTGGAGG TATCAGAAGT GCGAATGCTG ACATGAGTAA CGATAAGGGG AGTGAAAAAC TTCCCCGCCG GAAGATCAAG GTTTCCTGTC CAACGCTAAT CGGGACAGGG TTAGTCGGCC CCTAAGGCGA GGCAGAAATG CGTAGTCGAT GGGAAGCGCG TTAATATTCG TGCACCGACT GTTGCTGCGA TGGAGGGACG GAGTAGGCTA GGCGAGCACG GCGTTGGTTG TCCGTGTTTA AGCTTGTAGG CTGGTGACTT AGGTAAATCC GGGTCGCTAA GGCTGAGAGG TGATGACGAG TCCTCTTTTG GACGAAGTCG TTGATGCCAT GCTTCCAAGA AAATCTTCTA AGCTTCAGGT AACAGTTGAC CGTACTGTAA ACCGACACAG GTGATCAGGT AGAGAATACC AAGGCGCTTG AGAGAACTCG GGTGAAGGAA CTAGGCAAAA TAGTACCGTA ACTTCGGGAG AAGGTACGCC GGTTTTGGTG ATGGGACTTG CTCCCTAAGC TGAGACTGGT CGAAGTGACC AGGTGGCTGC GACTGTTTAT TAAAAACATA GCACTCTGCA AACACGAAAG TGGACGTATA GGGTGTGACG CCTGCCCGGT GCCGGAAGGT TAATTGATGG GGTTAGCTTC GGCGAAGCTC TTGATCGAAG CCCCGGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT AGCGAAATTC CTTGTCGGGT AAGTTCCGAC CTGCACGAAT GGCGTAACGA TGGCCACGCT GTCTCCACCC GAGACTCAGT GAAATTGAAA TCGCAGTTAA GATGCTGTGT ACCCGCGGCT AGACGGAAAG ACCCCGTGAA CCTTTACTAC AGCTTTGCAC TGAACTTTGA GCCTACTTGT GTAGGATAGC TGGGAGGCTT TGAAACTTAG ACGCTAGTTT GAGTGGAGCC AATCTTGAAA TACCAGCCTG GTATGTTTGA GGTTCTAACC TAGACCCCTT ATCGGGGTTG GGGACAGTGT ATGGTGGGTA GTTTGACTGG GGCGGTCTCC TCCCAAAGAG TAACGGAGGA GTACGAAGGT GCGCTCAGCA TGGTCGGAAA TCATGCATTG AGTATAATGG CAAAAGCGCG CTTGACTGCG AGACTGACAC GTCGAGCAGG TACGAAAGTA GGTCATAGTG ATCCGGTGGT TCTGTATGGA AGGGCCATCG CTCAACGGAT AAAAGGTACT CCGGGGATAA CAGGCTGATA CCGCCCAAGA GTTCACATCG ACGGCGGTGT TTGGCACCTC GATGTCGGCT CATCACATCC TGGGGCTGAA GCCGGTCCCA AGGGTATGGC TGTTCGCCAT TTAAAGTGGT ACGCGAGCTG GGTTTAGAAC GTCGTGAGAC AGTTCGGTCC CTATCTGCCG TGGGCGTTGG AAAGTTGAGA AGAGTTGCTC CTAGTACGAG AGGACCGGAG TGAACGAACC ACTGGTGTTC GGGTTGTCAT GCCAATGGCA TTGCCCGGTA GCTATGTTCG GACGGGATAA CCGCTGAAAG CATCTAAGCG GGAAGCCTCC TTCAAGATTA GCTTTCCCTG GGGCTTGACC CCCTAAAGGG CCGTTGAAGA CTACGACGTT GATAGGTCGG GTGTGGAAGC GCTGTGAGGC GTTGAGCTAA CCGATACTAA TTGCCCGTGA GGCTTGACCA TA
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Protein sequence | |
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