| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_R0013 |
|---|
| Symbol | |
|---|
| ID | 3968263 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 1409844 |
|---|
| End bp | 1411338 |
|---|
| Gene Length | 1495 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | 640713284 |
|---|
| Product | 16S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000161102 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.413867 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AGAGTTTGAT CATGGCTCAG ATTGAACGCT GGCGGCAGGC CTAACACATG CAAGTCGAGC
GAGAAAGCCT TCGGGTGAGT ATAGCGGCGG ACGGGTGAGT AACGCGTGGG AATCTACCCA
GTAGTGGGGG ACAACAGTTG GAAACGACTG CTAATACCGC ATACGTCCTA TGGGAGAAAG
GTGGCCTCTA TTTATAAGCT ATCGCTACTG GATGAGCCCG CGTCGGATTA GCTAGTAGGT
GGGGTAATGG CCCACCTAGG CGACGATCCG TAGCTGGTCT GAGAGGATGA TCAGCCACAC
TGGAACTGAG ACACGGTCCA GACTCCTACG GGAGGCAGCA GTGGGGAATA TTGCACAATG
GGCGAAAGCC TGATGCAGCC ATGCCGCGTG TGTGAAGAAG GCTTTCGGGT TGTAAAGCAC
TTTCAGTAGG GAGGAAAGGT TAGTAGTTAA TACCTGCTAG CTGTGACGTT ACCTACAGAA
GAAGCACCGG CTAACTCCGT GCCAGCAGCC GCGGTAATAC GGAGGGTGCA AGCGTTAATC
GGAATTACTG GGCGTAAAGC GCGCGTAGGC GGTTAGCTAA GCTAGATGTG AAAGCCCAGG
GCTTAACCTT GGAACTGCAT TTAGAACTGG TTGACTAGAG TATGGTAGAG GGGTGTGGAA
TTTCAGGTGT AGCGGTGAAA TGCGTAGAGA TCTGAAGGAA CATCAGTGGC GAAGGCGACA
CCCTGGACCA ATACTGACGC TGAGGTGCGA AAGCGTGGGG AGCAAACAGG ATTAGATACC
CTGGTAGTCC ACGCCGTAAA CGATGTCTAC TAGCCGTTGG GGTCCTTGAG GCCTTAGTGG
CGCAGCTAAC GCACTAAGTA GACCGCCTGG GGAGTACGGC CGCAAGGTTA AAACTCAAAT
GAATTGACGG GGGCCCGCAC AAGCGGTGGA GCATGTGGTT TAATTCGAAG CAACGCGAAG
AACCTTACCA GGTCTTGACA TCCAGAGAAC TTACTAGAAA TAGTTTGGTG CCTTCGGGAA
CTCTGAGACA GGTGCTGCAT GGCTGTCGTC AGCTCGTGTC GTGAGATGTT GGGTTAAGTC
CCGTAACGAG CGCAACCCTT GTCCTTAGTT GCTAGCAGGT AATGCTGAGA ACTCTAAGGA
GACTGCCGGT GACAAACCGG AGGAAGGTGG GGACGACGTC AAGTCATCAT GGCCCTTACG
ACCTGGGCTA CACACGTGCT ACAATGGTCA GTACAAAGGG TTGCCAAGCC GCGAGGTGGA
GCTAATCCCA TAAAACTGAT CGTAGTCCGG ATTGGAGTCT GCAACTCGAC TCCATGAAGT
CGGAATCGCT AGTAATCGTG AATCAGAATG TCACGGTGAA TACGTTCCCG GGCCTTGTAC
ACACCGCCCG TCACACCATG GGAGTGGGTT GCACCAGAAG TAGCTAGTCT AACCTTCGGG
GGGACGGTTA CCACGGTGTG ATTCATGACT GGGGTGAAGT CGTAACAAGG TAGCC
|
|---|
| Protein sequence | |
|---|
| |