Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3997 |
Symbol | |
ID | 3967416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 5030029 |
End bp | 5030826 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637923094 |
Product | glycyl-tRNA synthetase, alpha subunit |
Protein accession | YP_529464 |
Protein GI | 90023637 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACAC ACAATGCGGT AGCTACACCC AATGCTCTTT TACTGGAAGA AGCCAATTTA CATAACCTTA AAACCCTGTG GCACACTTAC GGCAGTAAGC TTGTGCACAA ACAAAATGGG TTGACGCTTT GGCGCAATAC GGGCTGGCCG CACCGCGCTT GGTTTGACAT AAATGAGCCA CACCCATCGC CAAATACAAC AAGCGATAGT AACGGCGAAC TCGTTGCAGC CATACAACAG TTACCAAAAG GCACTGTGCT GCCGCTATAC CCACATTTAT TGCACAATAG CCCAGTCGCG ACGGCGTTAG CAACGTGCAC GTTTAATGGG CCAGAGTTTA TGCAACAGGC CATGGTGTTG GCCTTAGAGA ATTTTAAACC AAACACAAAA GGTTACCCGC CCGAGCTTAA TTTTAAAACG GTAACCACTC AACCCAGCCT TAAAGCATGG TGCGCAGTAG CCAGCGCGGC GTTTGGCTAC AACGTGGCTA TAGCGAATGC ACAACAGCTT TTAGAGCAGC CCAATGCGTT GCTTATTCTT GCGTACAAAA ACGCTGTGCC AGTTGCTACT GCACTGGTAC TGTTAACAGG GCATACCGCT GGTATTCATC AGGTAGGGGT GTTGCCCACA CAACAGGGGC AAGGGTGGGC AAAGGCTATC ATGCAGTTTG TATTAAGCTA TGCGGTGCAA CAAAAAGCTC GGCACGCGGT GTTGCAAGCA TCTGCCGCGG GCGAGCCGCT ATATAAGCAA CTTGGTTTTA ACGCGCAGTT TTTAATAAAA AACGTCGTAT TAAGCTAA
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Protein sequence | MQTHNAVATP NALLLEEANL HNLKTLWHTY GSKLVHKQNG LTLWRNTGWP HRAWFDINEP HPSPNTTSDS NGELVAAIQQ LPKGTVLPLY PHLLHNSPVA TALATCTFNG PEFMQQAMVL ALENFKPNTK GYPPELNFKT VTTQPSLKAW CAVASAAFGY NVAIANAQQL LEQPNALLIL AYKNAVPVAT ALVLLTGHTA GIHQVGVLPT QQGQGWAKAI MQFVLSYAVQ QKARHAVLQA SAAGEPLYKQ LGFNAQFLIK NVVLS
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