Gene Sde_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3997 
Symbol 
ID3967416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp5030029 
End bp5030826 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content49% 
IMG OID637923094 
Productglycyl-tRNA synthetase, alpha subunit 
Protein accessionYP_529464 
Protein GI90023637 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAC ACAATGCGGT AGCTACACCC AATGCTCTTT TACTGGAAGA AGCCAATTTA 
CATAACCTTA AAACCCTGTG GCACACTTAC GGCAGTAAGC TTGTGCACAA ACAAAATGGG
TTGACGCTTT GGCGCAATAC GGGCTGGCCG CACCGCGCTT GGTTTGACAT AAATGAGCCA
CACCCATCGC CAAATACAAC AAGCGATAGT AACGGCGAAC TCGTTGCAGC CATACAACAG
TTACCAAAAG GCACTGTGCT GCCGCTATAC CCACATTTAT TGCACAATAG CCCAGTCGCG
ACGGCGTTAG CAACGTGCAC GTTTAATGGG CCAGAGTTTA TGCAACAGGC CATGGTGTTG
GCCTTAGAGA ATTTTAAACC AAACACAAAA GGTTACCCGC CCGAGCTTAA TTTTAAAACG
GTAACCACTC AACCCAGCCT TAAAGCATGG TGCGCAGTAG CCAGCGCGGC GTTTGGCTAC
AACGTGGCTA TAGCGAATGC ACAACAGCTT TTAGAGCAGC CCAATGCGTT GCTTATTCTT
GCGTACAAAA ACGCTGTGCC AGTTGCTACT GCACTGGTAC TGTTAACAGG GCATACCGCT
GGTATTCATC AGGTAGGGGT GTTGCCCACA CAACAGGGGC AAGGGTGGGC AAAGGCTATC
ATGCAGTTTG TATTAAGCTA TGCGGTGCAA CAAAAAGCTC GGCACGCGGT GTTGCAAGCA
TCTGCCGCGG GCGAGCCGCT ATATAAGCAA CTTGGTTTTA ACGCGCAGTT TTTAATAAAA
AACGTCGTAT TAAGCTAA
 
Protein sequence
MQTHNAVATP NALLLEEANL HNLKTLWHTY GSKLVHKQNG LTLWRNTGWP HRAWFDINEP 
HPSPNTTSDS NGELVAAIQQ LPKGTVLPLY PHLLHNSPVA TALATCTFNG PEFMQQAMVL
ALENFKPNTK GYPPELNFKT VTTQPSLKAW CAVASAAFGY NVAIANAQQL LEQPNALLIL
AYKNAVPVAT ALVLLTGHTA GIHQVGVLPT QQGQGWAKAI MQFVLSYAVQ QKARHAVLQA
SAAGEPLYKQ LGFNAQFLIK NVVLS