| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3990 |
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| Symbol | |
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| ID | 3967313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 5022921 |
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| End bp | 5023166 |
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| Gene Length | 246 bp |
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| Protein Length | 81 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637923087 |
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| Product | acetoacetyl-CoA synthase |
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| Protein accession | YP_529457 |
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| Protein GI | 90023630 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5302] Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.739311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCCCC TGTACGATAC CGAAGCCCCC AAAAAGCCAA CAAACCTCAG TGTAAACAGT
GACTTGCTGG CAAAAACGCG CGCCTTAAAC ATAAACCTTT CAGCCACATT AGAACAAGCC
TTAAAGCAGC AGTTGGCTCA AGCCGAAGCC ACAAAATGGG CAAAAAAGAA CAAAGCGGCC
ATTAAAGCAT ACAACTCCTT CGTAGAGGAG AATGGCTGCT TTGCTGACGA ATACAGGGCT
TTTTAA
|
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| Protein sequence | MDPLYDTEAP KKPTNLSVNS DLLAKTRALN INLSATLEQA LKQQLAQAEA TKWAKKNKAA
IKAYNSFVEE NGCFADEYRA F
|
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