| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3973 |
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| Symbol | |
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| ID | 3967277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 5004287 |
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| End bp | 5004610 |
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| Gene Length | 324 bp |
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| Protein Length | 107 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637923070 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_529440 |
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| Protein GI | 90023613 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3312] F0F1-type ATP synthase, subunit I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.03911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.271142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATACCAC TGTCCCTCAT TGGGTTTTTG GTGCACCCGC TTGCGGCTAA ATCATTCCTG
CTTGGGGCAA TTGTTTATAT GCTCCCCAAT CTTTATTTTA CCTATTACGC TTTTCGATAC
CGAGGCGCTC AAGCAGCGCG TTGGATAGCC CGCTCGTTTA GTTGGGGGCA ATCGGGCAAA
CTGGCTCTAG CGGCAGTAGG GTTTGCCTTA GTATTTCGAT TTGTTCAGCC ACTGCAGGTA
GAGTTTTTAT TTATCGGCTT TGGTTTCATG GTGGTTCTGC AGTGGTTTAT CGGCCTGCAG
GTAGCCAAAA ACTTTAGACT TTAA
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| Protein sequence | MIPLSLIGFL VHPLAAKSFL LGAIVYMLPN LYFTYYAFRY RGAQAARWIA RSFSWGQSGK
LALAAVGFAL VFRFVQPLQV EFLFIGFGFM VVLQWFIGLQ VAKNFRL
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