| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3969 |
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| Symbol | |
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| ID | 3967273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 5001945 |
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| End bp | 5002481 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637923066 |
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| Product | F0F1 ATP synthase subunit delta |
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| Protein accession | YP_529436 |
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| Protein GI | 90023609 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
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| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00110961 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.295514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAT TTACGACATT AGCTCGACCC TACGCTAAAG CTGCTTTTAT TGCCGCACGC
GATGCCAGCG ACCTAGGTGG TTGGTCCAAA GCGTTGGCGA CAGCAGCTGC AGTTTCTCAA
GTCGACCGTG TAAAAACTGT TTTGTCTGCT CCTGGCTTAA CTGCGCAACA AAAAGCCGAT
GCTTTTGTTG CGCTATGTGG CGAAGAGCTT GCTGAAAAGC AACAAAACTT TATACACGTA
TTGGCGGATA ATCGACGTTT AGCCCTACTC CCAGAAATTT CTGTTTTGTT TGATCTTTAC
AAAGCTAATC AAGAAAAATC ACTTGATGTG ACCGTAGAGA CCGCGTTTGA AATAGACGCA
GCGACAGAGA AAAAACTGGT TGAAGCGCTT AGCAAAAAAC TGGATCGAGA AGTCACCCTA
AGCACGGCGG TAGATAAAGC CCTGCTAGGT GGTGCGCTCA TCCGAGCGGG TGACACCGTA
ATAGATGGTT CTGTGCGCGG ACGTTTAGCA AAGCTTGCTG AAGCTATGAA CGTTTGA
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| Protein sequence | MAEFTTLARP YAKAAFIAAR DASDLGGWSK ALATAAAVSQ VDRVKTVLSA PGLTAQQKAD
AFVALCGEEL AEKQQNFIHV LADNRRLALL PEISVLFDLY KANQEKSLDV TVETAFEIDA
ATEKKLVEAL SKKLDREVTL STAVDKALLG GALIRAGDTV IDGSVRGRLA KLAEAMNV
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