| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3966 |
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| Symbol | |
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| ID | 3967270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4998034 |
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| End bp | 4999446 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637923063 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_529433 |
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| Protein GI | 90023606 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000531769 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.214208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGCG GACGTATCGT ACAAATCATC GGCGCTGTAA TTGACGTGGA ATTCCCACGC
GACTCAGTGC CAAAGGTTTA CGACGCTTTA ACCGTCGCAG ACAAAGGCCT CACCCTTGAA
GTACAGCAAC AGCTCGGCGA CGGCGTTGTT CGTGCAATTG CAATGGGTGG TTCTGAGGGT
GTTAGCCGCG GCCTAGCCGT AGAAAACACT GGTGCACCAA TCAACGTACC TGTTGGTACT
GCGACTCTTG GCCGCATCAT GGACGTATTG GGTAACCCTA TCGATGAAAA GGGCCCAATC
AACGAAACAG AACGTGCTTC TATCCACCGC AAAGCACCAA AATATGACGA GCTTGCGGCA
TCTGAAGAAC TACTAGCAAC CGGTATTAAA GTTATCGACC TAGTATGTCC TTTCGCTAAG
GGTGGTAAAG TTGGTCTGTT CGGTGGTGCC GGTGTGGGTA AAACCGTAAA CATGATGGAA
TTGATCAACA ACATCGCAAC CGAGCACAGC GGTTTATCCG TATTTGCTGG TGTGGGTGAG
CGTACTCGTG AAGGTAACGA CTTCTACTTC GAGATGCAGG AAGCCGGCGT TGTAAACGTT
GATAAATTCG ACGAATCTAA AGTGGCCATG GTTTATGGTC AGATGAACGA GCCACCTGGA
AACCGTTTGC GCGTAGCATT GACTGGTTTG ACCATGGCTG AAAAATTCCG TGACGAAGGT
AAAGACGTAC TGTTGTTCGT AGACAACATC TACCGTTACA CCTTGGCGGG GACCGAAGTA
TCTGCACTGT TGGGCCGTAT GCCTTCAGCG GTGGGCTACC AGCCTACTCT TGCTGAAGAA
ATGGGTGTGC TTCAGGAGCG TATTACTTCA ACCAAGACTG GTTCTATTAC TTCTATCCAA
GCGGTATACG TACCTGCGGA TGACTTGACT GACCCATCGC CAGCTACCAC CTTTGCTCAC
TTGGATTCAA CCGTTGTATT GAGTCGTGAT ATTGCAGCAA AAGGTATCTA CCCTGCTATC
GACCCATTGG ATTCTAGCTC ACGTCAGCTA GACCCATTAA TCATCGGTCA AGAGCACTAC
GATACTGCGC GTGGCGTACA GTCTGTTCTT CAGCGCTACA AAGAACTGAA AGATATTATT
GCCATTTTGG GTATGGATGA ATTGTCTGAA GAAGATAAAT TAACCGTATC TCGTGCACGT
AAAATCGAAC GTTTCTTATC TCAGCCATTT AACGTTGCAA AAGTATTTAC CGGTCAAGAC
GGTAAAATCG TATCGCTTAA AGACACCATC TCTGGCTTCC AGGGCTTGTT GAGCGGGCAA
TACGACGACT TACCTGAGCA GGCGTTCTAC ATGGTTGGCT CTATCGATGA AGCAATCGAA
AAAGCCAAGA AAATGAAAGA GAAAGCAGCG TAA
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| Protein sequence | MSSGRIVQII GAVIDVEFPR DSVPKVYDAL TVADKGLTLE VQQQLGDGVV RAIAMGGSEG
VSRGLAVENT GAPINVPVGT ATLGRIMDVL GNPIDEKGPI NETERASIHR KAPKYDELAA
SEELLATGIK VIDLVCPFAK GGKVGLFGGA GVGKTVNMME LINNIATEHS GLSVFAGVGE
RTREGNDFYF EMQEAGVVNV DKFDESKVAM VYGQMNEPPG NRLRVALTGL TMAEKFRDEG
KDVLLFVDNI YRYTLAGTEV SALLGRMPSA VGYQPTLAEE MGVLQERITS TKTGSITSIQ
AVYVPADDLT DPSPATTFAH LDSTVVLSRD IAAKGIYPAI DPLDSSSRQL DPLIIGQEHY
DTARGVQSVL QRYKELKDII AILGMDELSE EDKLTVSRAR KIERFLSQPF NVAKVFTGQD
GKIVSLKDTI SGFQGLLSGQ YDDLPEQAFY MVGSIDEAIE KAKKMKEKAA
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