Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3949 |
Symbol | |
ID | 3967214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4978444 |
End bp | 4979211 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637923046 |
Product | chitinase II |
Protein accession | YP_529416 |
Protein GI | 90023589 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.985635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAC GAAATACCCA GCAAAGACGC CGCCTTATAC TAGATACGCT CGCCGCCCAA GGCGAAGTAA GCGTAGAAGA GTTAGCGAGC GCCCTGGCCA CCTCTGAGGT GACCATACGC AAAGACCTGG CCGCGCTAGA AGATAACGGC CTGCTATTGC GTCGTTACGG CGGTGCAGTG TCTGTGCCAC AGGAGCTTCT GCAAGAGCCT GTAGCCAGTA AAATATCTGC CAATAAACTC GCCCTTGCCC ACGCCGCTGC TGCGCTTATC CGCGACCACA ACCGCATTAT TATCGACAGT GGCCGCACCA CTGCCGCCCT GCTACCCGAG CTTTCCAATA AAAATGGCTT GGTGGTAATG ACAAATTCCC TATCCATTGC CAATGCTTTG CGCGAGCTAG AAAACGAACC TACCCTGTTG ATGACCGGCG GCACATGGGA CCCCCATTCC GAAGCCTTTC AGGGCCAGCT AGCCGAGCAG GTGCTGCGCG CTTACGACTT CGACCAGTTG TTTATTGGCG CAGATGGCAT AGATTTAGAT CGCGGAACCA CCACGTTCAA CGAACTTTAC AGCTTAAGCC GCGTAATGGC AGAGGTTGCA CGCGAAGTAG TGGTTATGGC GGAATCGGAA AAGTTTGGCC GCAAAATTCA CAATTTAGAG TTGCCGTGGG AAATGGTAGA TGTACTAGTA ACCGATGCCG CACTCACCGC AGAAGCAAAG GCGACCATAG AATCCCACGG CGTACGCGTT GTGTGCGCAG GAACCTAA
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Protein sequence | MTKRNTQQRR RLILDTLAAQ GEVSVEELAS ALATSEVTIR KDLAALEDNG LLLRRYGGAV SVPQELLQEP VASKISANKL ALAHAAAALI RDHNRIIIDS GRTTAALLPE LSNKNGLVVM TNSLSIANAL RELENEPTLL MTGGTWDPHS EAFQGQLAEQ VLRAYDFDQL FIGADGIDLD RGTTTFNELY SLSRVMAEVA REVVVMAESE KFGRKIHNLE LPWEMVDVLV TDAALTAEAK ATIESHGVRV VCAGT
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