Gene Sde_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3949 
Symbol 
ID3967214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4978444 
End bp4979211 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content54% 
IMG OID637923046 
Productchitinase II 
Protein accessionYP_529416 
Protein GI90023589 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.985635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC GAAATACCCA GCAAAGACGC CGCCTTATAC TAGATACGCT CGCCGCCCAA 
GGCGAAGTAA GCGTAGAAGA GTTAGCGAGC GCCCTGGCCA CCTCTGAGGT GACCATACGC
AAAGACCTGG CCGCGCTAGA AGATAACGGC CTGCTATTGC GTCGTTACGG CGGTGCAGTG
TCTGTGCCAC AGGAGCTTCT GCAAGAGCCT GTAGCCAGTA AAATATCTGC CAATAAACTC
GCCCTTGCCC ACGCCGCTGC TGCGCTTATC CGCGACCACA ACCGCATTAT TATCGACAGT
GGCCGCACCA CTGCCGCCCT GCTACCCGAG CTTTCCAATA AAAATGGCTT GGTGGTAATG
ACAAATTCCC TATCCATTGC CAATGCTTTG CGCGAGCTAG AAAACGAACC TACCCTGTTG
ATGACCGGCG GCACATGGGA CCCCCATTCC GAAGCCTTTC AGGGCCAGCT AGCCGAGCAG
GTGCTGCGCG CTTACGACTT CGACCAGTTG TTTATTGGCG CAGATGGCAT AGATTTAGAT
CGCGGAACCA CCACGTTCAA CGAACTTTAC AGCTTAAGCC GCGTAATGGC AGAGGTTGCA
CGCGAAGTAG TGGTTATGGC GGAATCGGAA AAGTTTGGCC GCAAAATTCA CAATTTAGAG
TTGCCGTGGG AAATGGTAGA TGTACTAGTA ACCGATGCCG CACTCACCGC AGAAGCAAAG
GCGACCATAG AATCCCACGG CGTACGCGTT GTGTGCGCAG GAACCTAA
 
Protein sequence
MTKRNTQQRR RLILDTLAAQ GEVSVEELAS ALATSEVTIR KDLAALEDNG LLLRRYGGAV 
SVPQELLQEP VASKISANKL ALAHAAAALI RDHNRIIIDS GRTTAALLPE LSNKNGLVVM
TNSLSIANAL RELENEPTLL MTGGTWDPHS EAFQGQLAEQ VLRAYDFDQL FIGADGIDLD
RGTTTFNELY SLSRVMAEVA REVVVMAESE KFGRKIHNLE LPWEMVDVLV TDAALTAEAK
ATIESHGVRV VCAGT