| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3947 |
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| Symbol | |
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| ID | 3967212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4974930 |
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| End bp | 4976186 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637923044 |
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| Product | hypothetical protein |
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| Protein accession | YP_529414 |
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| Protein GI | 90023587 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4289] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.174675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC GCGATTTTTT AAACGCCGCT GCATTGGGCG GTGCCGCATA TATGACGGGT
TTACCGCAAT TTGCCAATGC TAAAACGCTT ACTACCGGTC AACAGGATCA CACCTACTTT
GCAAATTTAT TAGAGAAAAT TTGTTCGCCT ATTTTGCATT TAATGGCTAA CGAACAATTC
CATGCAAAGT TCCCATTAGA GGTAGGAGCC AACAGTGATG GACGCGACCA TCGCGTTGCC
TACCTTGAAT GTTTTGGCCG CACCATTGCT GGCGCTGCAC CTTGGTTAGC ACTTGATACA
CCCGGCCCAG AAAAAGCCAC ACGCAGCAAG CTAAGAGACC AAGCCATTGC GGCCTATGAA
AATTCCGTGA ACCCCAAAAG CCCCGATTAC CTCGACTGGC AAGTAGGCCA CGGCCAAATG
TTGGTGGACT CTGCCTACTA CACCCAAGCA CTTATACGTG CGCCTATTTT GTGGCAAAAG
CTTACCCGTA AAACTCAGCA GCGTATTGTA AAAGAGATAA AGGCGTTGCG AAAAATTCCA
CCGCCCTACA CCAATTGGCT GCTATTCGCC GCCATGAACG AAGCATTTTT AATGCAAGTA
GGGGAAGAGT ACGACCCCAT TCGACTCGAT CTAGCACTGC GAAAATTTTT AGAGTGGTAC
GTAGGCGACG GATGGTTTGC AGATGGCGAG CACTTCGCGT TTGACTACTA CGGCTCTTAC
GTTATTCACC CCATGCTGTT AGATATATTA GAAGTGATGG CTGCCCACAA CACCTACTTT
TGGCACGGGG ACATCAAAGA CGTACTGGCA ACTCATTTAA AACGCAATCA ACGCTTCGCC
GAACATTTAG AGCGCTTGAT TTCACCTACG GGTACCTACC CACCTATAGG GCGCTCATTT
ACCTATCGCA CCGCGGCTTT TCAACCACTC GCGCAACTAG CACTAAAACA CAAGCTGCCC
GATAGCTTAC CGCAAGGCAG AGTGCGCGCA GCAATGCGCG CCGTTCACGA AGCCATTTTC
AGCAACCCTT CAAACTTTAG CAAAGAGGGG TTTTTAAAAA TTGGTTTTGC AGGCGCCGAC
CTTTCGCTTG CCGATTGGTA TTCCAACAAT GGCAGCATGT ACATAACAAC CGCAAGCTTT
TTACCCCTTG GGCTACCACT TAGCGACCCC TACTGGCAGG TACCAGGCGA AGATTGGACA
CAAAAACTGG CGTTTAGCGG GCAGAAATTT AAGAAGGATT ATTCAGTTTC TTATTAA
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| Protein sequence | MKRRDFLNAA ALGGAAYMTG LPQFANAKTL TTGQQDHTYF ANLLEKICSP ILHLMANEQF
HAKFPLEVGA NSDGRDHRVA YLECFGRTIA GAAPWLALDT PGPEKATRSK LRDQAIAAYE
NSVNPKSPDY LDWQVGHGQM LVDSAYYTQA LIRAPILWQK LTRKTQQRIV KEIKALRKIP
PPYTNWLLFA AMNEAFLMQV GEEYDPIRLD LALRKFLEWY VGDGWFADGE HFAFDYYGSY
VIHPMLLDIL EVMAAHNTYF WHGDIKDVLA THLKRNQRFA EHLERLISPT GTYPPIGRSF
TYRTAAFQPL AQLALKHKLP DSLPQGRVRA AMRAVHEAIF SNPSNFSKEG FLKIGFAGAD
LSLADWYSNN GSMYITTASF LPLGLPLSDP YWQVPGEDWT QKLAFSGQKF KKDYSVSY
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