Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3940 |
Symbol | |
ID | 3967205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4966297 |
End bp | 4966779 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637923037 |
Product | hypothetical protein |
Protein accession | YP_529407 |
Protein GI | 90023580 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.393279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACTC AACATTTAGG TGCCACAGCA CCTTGCTGTA ACAAGAATAC GCAACCTTCT GGCGGGTTCT GGCGCGATAA AAAAGTTTGG CAGCGCTCGG CATACAACAC AGGTTGGTGT TTGCTTGGCT GTGCTATTGG TGACTTTGGC ACCATATTAG CTTTTCAGCT GTGGTCACCT ACAACCCCCG CTATCTTGGT GATGGGCTTA GCGATGATGA ACGGGCTGCT TACCAGCATT ATGTTGGAAA CCCTATTATT GCGTCGCTCC ATGACTTGGG GAATAGCGTT TAAAACGGCG ATAGGTATGA GCCTAGTGAG CATGATTGCG ATGGAGCTGG CCATGAACCT TACCGACTAC GCCTTGGTGG GTGCGGCGGC GCTTACTTGG TGGTCGGTTC TGCCTAGCTT GGCCGCGGGT TTTATAGCGC CTTGGCCTTA TAACTACTGG CGTTTAAAGA AATATGGTAA GGCCTGCCAT TAG
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Protein sequence | MATQHLGATA PCCNKNTQPS GGFWRDKKVW QRSAYNTGWC LLGCAIGDFG TILAFQLWSP TTPAILVMGL AMMNGLLTSI MLETLLLRRS MTWGIAFKTA IGMSLVSMIA MELAMNLTDY ALVGAAALTW WSVLPSLAAG FIAPWPYNYW RLKKYGKACH
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