Gene Sde_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3940 
Symbol 
ID3967205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4966297 
End bp4966779 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content51% 
IMG OID637923037 
Producthypothetical protein 
Protein accessionYP_529407 
Protein GI90023580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.393279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTC AACATTTAGG TGCCACAGCA CCTTGCTGTA ACAAGAATAC GCAACCTTCT 
GGCGGGTTCT GGCGCGATAA AAAAGTTTGG CAGCGCTCGG CATACAACAC AGGTTGGTGT
TTGCTTGGCT GTGCTATTGG TGACTTTGGC ACCATATTAG CTTTTCAGCT GTGGTCACCT
ACAACCCCCG CTATCTTGGT GATGGGCTTA GCGATGATGA ACGGGCTGCT TACCAGCATT
ATGTTGGAAA CCCTATTATT GCGTCGCTCC ATGACTTGGG GAATAGCGTT TAAAACGGCG
ATAGGTATGA GCCTAGTGAG CATGATTGCG ATGGAGCTGG CCATGAACCT TACCGACTAC
GCCTTGGTGG GTGCGGCGGC GCTTACTTGG TGGTCGGTTC TGCCTAGCTT GGCCGCGGGT
TTTATAGCGC CTTGGCCTTA TAACTACTGG CGTTTAAAGA AATATGGTAA GGCCTGCCAT
TAG
 
Protein sequence
MATQHLGATA PCCNKNTQPS GGFWRDKKVW QRSAYNTGWC LLGCAIGDFG TILAFQLWSP 
TTPAILVMGL AMMNGLLTSI MLETLLLRRS MTWGIAFKTA IGMSLVSMIA MELAMNLTDY
ALVGAAALTW WSVLPSLAAG FIAPWPYNYW RLKKYGKACH