Gene Sde_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3924 
Symbol 
ID3967189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4943597 
End bp4944208 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content40% 
IMG OID637923021 
Producthypothetical protein 
Protein accessionYP_529391 
Protein GI90023564 
COG category[S] Function unknown 
COG ID[COG4339] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.924156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAT CACATTGGCT ACAACTAATG AAACGCCTTT CATTACCGCA AAGCCTTAGC 
ACCTATACCC AGTTGTGTGC CGCATACACC GAAACCCACA GGTTTTATCA CACCTTGCAA
CATATAAACG CTTGTTTAAT ACACTTGAAT AATACTGAGC GACTAGCCAC CGAACCCGAC
CACATTGCTT TAGCACTTTG GTTTCACGAT GCGATCTATC AACCGTTTTC CACTAACAAC
GAGCAACAAA GTGCAGACTG GGCACAACGC TTTTTAGTTG GCCTAAATGC ATCACCAGCT
TTAATAGATA ACGTGTATCG CTTAATTATG GCAACGGCAC ACAACAGTGA GCCTCAGCAT
GATGATGAGC GTTTAATTGT GGATATAGAT TTAACTATTT TAGGGGCGCC ACCAACCATT
TTTGAAGAGT TTGAACAAAA CATTCGAAAC GAATACAAAC GCGTGCCTAC TTTTATTTAC
AAATCTAAAC GTAAGAAGAT ATTACAGCAG TTTTTGGCAA GACCTAGGCT GTACTACTTC
GATTATTTTT TCGATATGTT CGAAACGCAA GCCCGAGAAA ATTTAAATAA TGTTATCAGC
AAGTTAAATT AG
 
Protein sequence
MLESHWLQLM KRLSLPQSLS TYTQLCAAYT ETHRFYHTLQ HINACLIHLN NTERLATEPD 
HIALALWFHD AIYQPFSTNN EQQSADWAQR FLVGLNASPA LIDNVYRLIM ATAHNSEPQH
DDERLIVDID LTILGAPPTI FEEFEQNIRN EYKRVPTFIY KSKRKKILQQ FLARPRLYYF
DYFFDMFETQ ARENLNNVIS KLN