| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3902 |
|---|
| Symbol | |
|---|
| ID | 3967167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 4921217 |
|---|
| End bp | 4922029 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637922999 |
|---|
| Product | heavy metal efflux pump CzcA |
|---|
| Protein accession | YP_529369 |
|---|
| Protein GI | 90023542 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC ACCGTGGCAA CGCATCTATG CGCACGTTAT TAGGGTTGGC TTTAATAGTA
TTCGCCGTAC TGCTGTTTTT TAAAAATATT GGCATTCACT TTTCGGGAAT GTTGCTAGGC
AACTGGCCCA TTGCCCTTAT CGTGATAGGT GGTGTTTTAC TTTACAGCGG TAAAAAAAGC
GATGACGAAA ATAAGCAAAC CGAATTCTTA CCGTATTTTC TAATAGGTAT TGGTGTTCTA
TTTTTACTGT CTAAGTACAG CATTATTAGC TTGAGTATAG GTGCACTTAT TGGGCCGCTA
GTATTGCTAT TTATAGGGGT AAATATTTTG CGGCCTCACA AAAAACGCAG CCAAAAAAAC
TATAGCGAAA CCAAAGACGA GCAAGCAACC GATGCCGATG TGTTAGACGG TGAATGGGAG
CCAATGGATG ATGGCTCGAT AAAAAGCGCT GCACCAGCCA GTAACGGTGA AGATACCCAA
ATAGATGTAT TTACTATTCT TGGTGGTGGC AACTTTTCTA CACGTTCTAA AGCCCTTTCG
GGCGGTAATG TAATTGCGTT ACTCGGCGGG GTAGATATAG ATATCCGCGA AGCAGATGCT
AATCAGCCTA CCATAGAAAT AGAAGTACTT GCTGTAATGG GGGGAGTAGA AATTAAAGTA
CCGCCCCACT GGGATGTGGT AGTTAAAGTA TTGCCTTTAC TTGGTGGTGT ATCTAACAAA
ACCACTTGCC TAGCAGAAAA GCTAAGCTTA CCCAAAAAAC GCGTAGTTGT TACCGGTGTA
GCGTTTATGG GTGGAGTAGA AATTAGAAAC TAA
|
|---|
| Protein sequence | MKKHRGNASM RTLLGLALIV FAVLLFFKNI GIHFSGMLLG NWPIALIVIG GVLLYSGKKS
DDENKQTEFL PYFLIGIGVL FLLSKYSIIS LSIGALIGPL VLLFIGVNIL RPHKKRSQKN
YSETKDEQAT DADVLDGEWE PMDDGSIKSA APASNGEDTQ IDVFTILGGG NFSTRSKALS
GGNVIALLGG VDIDIREADA NQPTIEIEVL AVMGGVEIKV PPHWDVVVKV LPLLGGVSNK
TTCLAEKLSL PKKRVVVTGV AFMGGVEIRN
|
|---|
| |