| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3895 |
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| Symbol | |
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| ID | 3967120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4916037 |
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| End bp | 4916528 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922992 |
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| Product | sigma-24 (FecI-like) |
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| Protein accession | YP_529362 |
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| Protein GI | 90023535 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTTC AATACCGAAC CTACGTTAAC CAGTACCAAC GCCTTGTATA TAGCAAGGCC
TTGCACATGC TGGGTAACAG TACCGAAGCA GAGGACGCAT GCCAAGAGGT ATACGAGCGC
CTGTGGAAGC ATATAAGCAA GGTAGAAGAC CACCACGCCA AAGCATGGTT GCTACACGTA
ACCCGCAATG TGTGTATAGA CCTGCTGCGC AAACGCACAG ATACCCAAGC GCTAGATGAA
GAGCTTGTAT GCGAGCGCAG CGACGGCAAC CCAAGCAACG CACTGGCAAA CAGCCAATTA
AGCCATTGGC TTACACATGC CTTAAGCAAA ATGAAAGAAC CGTACAAAAG CCTAATTCAA
ATGGCCGAGA TACAGCAACA AAGTGTGAAA ACTATTGCCC AACACCTTGG GTTAAGCGAG
AACCAAGTAA AGGTGTACAG CCACCGCGCC CGCCAACAAT TGCGCGCACT TTTGCAAGGG
GTAGACCTAT GA
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| Protein sequence | MEFQYRTYVN QYQRLVYSKA LHMLGNSTEA EDACQEVYER LWKHISKVED HHAKAWLLHV
TRNVCIDLLR KRTDTQALDE ELVCERSDGN PSNALANSQL SHWLTHALSK MKEPYKSLIQ
MAEIQQQSVK TIAQHLGLSE NQVKVYSHRA RQQLRALLQG VDL
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