Gene Sde_3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3889 
Symbol 
ID3967114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4910056 
End bp4910508 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content43% 
IMG OID637922986 
Producthypothetical protein 
Protein accessionYP_529356 
Protein GI90023529 
COG category[S] Function unknown 
COG ID[COG4704] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA TACTTAGTAA GCATATAGCC GCTGGCATAC TTTCAAGCTT AGTAGCCACA 
ACAGGCATGG CTGCAGAACT AACCGTAACG GTAAAAGGTA TAGCCAAAGC CGAAGGTAAC
TTAATTGTAA ATGTGTATAA AGAGAGTGAT GATTGGCTAT CGCTTGATGC TGGCGCCGCG
ACAAAAACAT TTGTTGTCGA TTTAACTAAA GCCGAATCTT TAAATGCTAT TAAAGTAAAA
GCAGATTTGC CAAAGGGTGT ATACGCTGCC ACTGCAATTC ACGATTTAAA CAGCGATGGC
AAACTAGGTA AAAACTGGAT GGGCATTCCG CAGGAGCCTG TCGGCCAAAC AGGTGACAGT
AAAAAATTGA TGGGGCCACC TAAATTTAAG GCCAGCGCAT TCGCAGTGGA AGAGGCCGCA
GTAGCGCAAG AGATTGTAAT TGTTGGATAT TAG
 
Protein sequence
MKTILSKHIA AGILSSLVAT TGMAAELTVT VKGIAKAEGN LIVNVYKESD DWLSLDAGAA 
TKTFVVDLTK AESLNAIKVK ADLPKGVYAA TAIHDLNSDG KLGKNWMGIP QEPVGQTGDS
KKLMGPPKFK ASAFAVEEAA VAQEIVIVGY