| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3879 |
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| Symbol | |
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| ID | 3967104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4890347 |
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| End bp | 4891228 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637922976 |
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| Product | transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase |
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| Protein accession | YP_529346 |
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| Protein GI | 90023519 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0350] Methylated DNA-protein cysteine methyltransferase
[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | [TIGR00589] O-6-methylguanine DNA methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.612619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.1278 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCACC CAGCAACACG TGTCGCAATA GAAAACAGCG AACAACACGC GCACTACAAA
ATAGTCGAGC GTGCTATCAC CTACCTAGTG GCTAATCAGC GCGAGCAACC TAGTCTTGCT
TTAGTAGCCA AACAAGTGGG CCTAAGTGAA TCGCGCCTGC AGCGTGTGTT TACCGATTGG
GCCGGTGTTT CGCCTAAGCA GTTTCTGCAA TTTTTAACGA AAGAGCATGC AAAACAAGCA
CTTACCCACG CACCGGTATT AGAAGCAGCC CTTGCTAGCG GGTTGAGCGG CAGTGGCCGC
CTGCACGATT TAATGGTGCG CTGCGAAAGC ATTACCCCAG GCGAATACAA AAAGCAGGGC
GCCGGTTTAA CAATAGAATA CGGCGCCCAC AGCTCGCCTT TTGGCTTTTG TTTTATTGCA
GTTACCCCTC GCGGCGTATG TAAGCTGGCG TTTTATGATC AACAGCGCGA GCACGCGTTA
CTGGTTGACG AGCTACAAGC CGATTGGCCC AACGCTACGC TGGTGCATAG CCCTACGGGT
ACCGAATACA GCTTTCGACA AATATTTGGC AACGGGCAAT CGCGCGGCGA TATAAAACTG
TTATTAAAAG GCACGCCATT TAGGTTACAA GTGTGGGAGG CGCTGCTGCG TATTCCTAGC
GGACAACTTC TTAGTTATCA ACAGGTTGCC GATGCAATAG GCAAGCCCAA TAGTGTGCGT
GCGGTTGCCT CTGCCATTGC CAGTAATCAC ATTGGGTATG TGATTCCCTG CCACCGCGTT
ATTCGCAACA CGGGTGGTTT AAGCGAATAC CGCTGGGGTG CGTATAGAAA GCGCAGCCTA
ATAGGGTGGG AGCAGGCGCA AATTGTGAAG CGTGTAGATT AA
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| Protein sequence | MPHPATRVAI ENSEQHAHYK IVERAITYLV ANQREQPSLA LVAKQVGLSE SRLQRVFTDW
AGVSPKQFLQ FLTKEHAKQA LTHAPVLEAA LASGLSGSGR LHDLMVRCES ITPGEYKKQG
AGLTIEYGAH SSPFGFCFIA VTPRGVCKLA FYDQQREHAL LVDELQADWP NATLVHSPTG
TEYSFRQIFG NGQSRGDIKL LLKGTPFRLQ VWEALLRIPS GQLLSYQQVA DAIGKPNSVR
AVASAIASNH IGYVIPCHRV IRNTGGLSEY RWGAYRKRSL IGWEQAQIVK RVD
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