Gene Sde_3874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3874 
Symbol 
ID3967041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand+ 
Start bp4883806 
End bp4884372 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content41% 
IMG OID637922971 
Producthypothetical protein 
Protein accessionYP_529341 
Protein GI90023514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.912957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.123813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTAC AAGAATTTAT TATCCGCTAC GCTATTTTTC TTATTGCCGC ACTTATTATG 
TTGCGCGGTG TTTATTTTAG AAACACACCT AACCGCGAGG TATTTTTAGG CATATTTATG 
TTTGGCAACG GGGTATTTTT AATTACCTAC TTGCTGCACA GCGTAGAAAT GTCTATGGGT 
TTTGCCTTTG GCTTATTTGC CGTGTTTTCT ATGCTGCGCT ACCGCACAGA AGCGTTAACC 
GTACGCGATA TGACTTACTT GTTTACTGCA ATTGTTATGT CGCTTATGTG CTCGGTGGCA 
GAAATAAATT TTTTCGAAAT ATCCGCACTG TGCGGGGTAA TTATTTTATT AACCGCCCTT 
TCCGAAACTC AAGTATTCGC GCCCACTATT ACCGAGCGCC GTATTAGCTA CGACCGCATA 
GATAATATTC AACCAGAAAA CCGCGCTCAA TTACTTGCCG AAGTACGTAA ACGCACCGGT 
ATGAACATAG TAAAAATTGA ATTAGGCAAA GTAGATTTTC TAAACGATAG CGTACAACTC 
GTTGTATTTT GTGCAGAAGA GGGATAA
 
Protein sequence
MFVQEFIIRY AIFLIAALIM LRGVYFRNTP NREVFLGIFM FGNGVFLITY LLHSVEMSMG 
FAFGLFAVFS MLRYRTEALT VRDMTYLFTA IVMSLMCSVA EINFFEISAL CGVIILLTAL 
SETQVFAPTI TERRISYDRI DNIQPENRAQ LLAEVRKRTG MNIVKIELGK VDFLNDSVQL 
VVFCAEEG