| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3835 |
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| Symbol | |
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| ID | 3966946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4835138 |
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| End bp | 4836415 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922932 |
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| Product | excitatory amino acid transporter |
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| Protein accession | YP_529302 |
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| Protein GI | 90023475 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0012663 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAGC TAAAACTTCA CTGGCAAATT CTTATCGCTA TTGCAGCCGC ATTTTTGGTG
GGGGGCGTAG TCAATTTTGC TGGCGATGCC ACCTGGGCAA AGGCCATTGT GAATGCCGGT
GAATTTATAG GCACATTTTT TCTTAACGCG TTAAAAATGA TTATTGTGCC GCTGGTACTG
TCGTCCATTA TTTGCGGCGT AGCGGGCATG GGTAAAGGGG CAGATCTAGG GCGCTTGGGC
GCAAAGGCAT TAAGCTTTTA TGCGCTTAGC AGCACCATAG CCATTTTGGT TGGCTTGCTG
GTGGTAAACG TGATGACGCC GGGTGAAATT AACGGTGAGC CGGCGCGCGA TCAATTAAAC
CTTAGCTCTA CCGAGCAAGT AGACCAGCAG TTAGCCAAAG TAGAAGGGCG CGGTTTGGGT
GATGTAGCTG CCGTATTTTT GCGCATGGTA CCGCCCAATT TGGTCGAGGC GGCTGCCGAA
GGGCAAATGC TGGGGCTAAT TACTTTTGGT TTGTTGTTCG GCTTTTTTAT GGTGCGCGTG
GCACCGGCGG CCAGCGAGAC GTTAATGAAT TTTTGGACCG GCGTTTCTGA GGTGATGATG
AAAATCACCA TGCTGGTAAT GAAATTTGCC CCGCTGGGGG TGTTTGGCTT GGTTACGGTT
ACTATTGCTG GTACCGGGTT GGAAATTTTG GCCAACTTGG CAGTGTTCTT TTTTACCGTC
ACCTTTGCAC TTGCCATACA CGTACTGGTT GTTATGCCGC TGTTACTGCG TTATTTGGGA
GGAGTGAAAA ACCCTTACCG CCAAATTGCG TTTATGGCGC CGGCCCTGCT TACTGCTTTT
TCGACTGCAT CGTCTTCGGG CACGCTGCCA TTAACAATGG ATTGTGTAGA GAAAAACGCT
GGGGTATCTA AGCGCACCAG CTCGTTTGTT TTACCCTTGG GCGCAACCAT TAACATGGAC
GGCACCGCAT TGTATGAGTG TGTGGCAGCC ATGTTTATTG CACAGGCGTA CGGTTTAGAT
TTAACCATTG GTGTGCAATT TACCATTGTG CTTATTGCGC TGCTCACCTC TATTGGCGTT
GCCGGCATAC CCTCTGCAAG CCTTATGGCT ATTACGGTTA TTCTTACCGC TGTAGGCTTA
CCCTTAGAGG GCATTGGCTT ACTACTGGTT ACCGATAGAA TTCTGGATAT GATGCGCACC
GCCGTAAACG TATTTAGCGA CAGCTGCTGC GCAACAATTA TAGCCAGAAC CGAAGGCGAA
AAAACTAACT TCGAATAA
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| Protein sequence | MLKLKLHWQI LIAIAAAFLV GGVVNFAGDA TWAKAIVNAG EFIGTFFLNA LKMIIVPLVL
SSIICGVAGM GKGADLGRLG AKALSFYALS STIAILVGLL VVNVMTPGEI NGEPARDQLN
LSSTEQVDQQ LAKVEGRGLG DVAAVFLRMV PPNLVEAAAE GQMLGLITFG LLFGFFMVRV
APAASETLMN FWTGVSEVMM KITMLVMKFA PLGVFGLVTV TIAGTGLEIL ANLAVFFFTV
TFALAIHVLV VMPLLLRYLG GVKNPYRQIA FMAPALLTAF STASSSGTLP LTMDCVEKNA
GVSKRTSSFV LPLGATINMD GTALYECVAA MFIAQAYGLD LTIGVQFTIV LIALLTSIGV
AGIPSASLMA ITVILTAVGL PLEGIGLLLV TDRILDMMRT AVNVFSDSCC ATIIARTEGE
KTNFE
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