| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3834 |
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| Symbol | |
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| ID | 3966945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4833852 |
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| End bp | 4834967 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637922931 |
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| Product | sugar efflux transporter |
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| Protein accession | YP_529301 |
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| Protein GI | 90023474 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTTG TTGTAGGCCT ATTATTCGCG CTAGTGATGC CCACCTTGAG TGTATTAGTG
GCCAAGGGGC TGGGCGTACG TCCGTTTTTG GTGGGAGTAT TTTTTGTAGC TATGGCTGCG
AGCAGTATTG TGTTCTCTCA CATGCTGGCC ACTTGGTCCG ATAAAGTTAA CGACCGCCGC
CCTCTAATAA TGGCCGGTAT GCTATTTGGC GCGGCGTCGT GTTTGGTGTT TGCATTTTCT
AGTAATTATT GGGTGCTGCT AGGGTTGGGC TCCACCCTGT TTAGCCTCTC GTTTGCGTTT
ACCTCGCAAA TGTTTGCCCA CGCCCGCGAA TTTGCCGACC AGCGTTTAAC CCTTGGCCAA
AACACGCTGT TTAACTCTAT TGTGCGCGCA GGTATCGCTG TTGCCTGGGT ATCTGGGCCG
CCCATCGGGT TTGCGCTGTA CAACTATTTG GGTATTCAAA GGCATTACAC CTACGTGGCC
ATTGCCTATA TTGCCGCCGG GCTTCTTGCT TGGCTGGCGC TGCCCAAGGC AGAAAAATTT
GATACCAGCG CCTTGGCGCC CATCCCAGCC AGTCACAAGC AACAAGTAGT AATAGCGATA
ATTGCCTTCG CGTTTTTATA TGCCTGCAAC CAAACCTACT TGATTGCGCT CCCCCTGTAT
TTACCAGAGC ACCTAGGTTT AGACAGTAGC TACGCTGGCT GGATTATGGG TACCGCTGCC
GCGCTAGAAA TACCTATTAT GATTTTTGGC GGCTGGCTAG GCACGCGCTA CCCACTTATT
GCGCTTATAC GCATAGGCGG CCTGTGCGCA GCGGCACTTT ACCTAGGCAT TTGGAATGCC
ACAGCCCTAT GGCAGTTATT CGTACTACAG CTACTAAACG CGGTGTTTAT TGGGTTTGTG
GCCGGGCTAG GTATGACGTG GTTTCAAGAT ATGATGCCCG GCAAAGCGGG CGCGGCATCG
GCACTGTACT TGAACGCCAA TAATATAGGT AACTTACTGG GCAGTTTGGT TATTGCAGTA
TTTGCCGAAG CCTTAGGCTA CCGGCATATC TTTTTGATTA TGATTGCCAT TGCGGCTTGC
GCGGTGGTGA CGCTATCGTT ATTGGATAAG AGATAG
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| Protein sequence | MSFVVGLLFA LVMPTLSVLV AKGLGVRPFL VGVFFVAMAA SSIVFSHMLA TWSDKVNDRR
PLIMAGMLFG AASCLVFAFS SNYWVLLGLG STLFSLSFAF TSQMFAHARE FADQRLTLGQ
NTLFNSIVRA GIAVAWVSGP PIGFALYNYL GIQRHYTYVA IAYIAAGLLA WLALPKAEKF
DTSALAPIPA SHKQQVVIAI IAFAFLYACN QTYLIALPLY LPEHLGLDSS YAGWIMGTAA
ALEIPIMIFG GWLGTRYPLI ALIRIGGLCA AALYLGIWNA TALWQLFVLQ LLNAVFIGFV
AGLGMTWFQD MMPGKAGAAS ALYLNANNIG NLLGSLVIAV FAEALGYRHI FLIMIAIAAC
AVVTLSLLDK R
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